Hb_007111_040

Information

Type -
Description -
Location Contig7111: 37589-38287
Sequence    

Annotation

kegg
ID rcu:RCOM_1399270
description zinc finger protein, putative
nr
ID XP_012064878.1
description PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LA56
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05580 PE=4 SV=1
Gene Ontology
ID GO:0003676
description zinc finger

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007111_040 0.0 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
2 Hb_011644_020 0.0872783793 - - PREDICTED: choline-phosphate cytidylyltransferase 2 [Vitis vinifera]
3 Hb_019871_020 0.0917069076 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
4 Hb_000392_280 0.1008623916 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
5 Hb_000300_540 0.1011071305 - - PREDICTED: syntaxin-132 [Jatropha curcas]
6 Hb_006029_010 0.101806726 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Populus euphratica]
7 Hb_000684_180 0.1025092296 - - PREDICTED: importin subunit alpha-9 isoform X1 [Jatropha curcas]
8 Hb_002172_030 0.1051328386 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105639104 isoform X1 [Jatropha curcas]
9 Hb_001846_080 0.105861354 - - PREDICTED: poly(rC)-binding protein 3-like [Nicotiana sylvestris]
10 Hb_001016_060 0.1063614121 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009421_100 0.1068878566 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os01g0234100-like [Jatropha curcas]
12 Hb_000363_340 0.107335569 - - PREDICTED: syntaxin-52-like isoform X2 [Jatropha curcas]
13 Hb_001195_030 0.1083446306 - - auxilin, putative [Ricinus communis]
14 Hb_007441_070 0.1083562861 - - hypothetical protein PRUPE_ppa004494mg [Prunus persica]
15 Hb_174865_050 0.1103601571 - - PREDICTED: neuroguidin [Jatropha curcas]
16 Hb_000940_040 0.110453212 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
17 Hb_002405_020 0.1113946004 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
18 Hb_000210_130 0.1114435724 - - PREDICTED: chaperone protein ClpB4, mitochondrial [Vitis vinifera]
19 Hb_001623_580 0.1120661766 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
20 Hb_007534_040 0.1123314271 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]

Gene co-expression network

sample Hb_007111_040 Hb_007111_040 Hb_011644_020 Hb_011644_020 Hb_007111_040--Hb_011644_020 Hb_019871_020 Hb_019871_020 Hb_007111_040--Hb_019871_020 Hb_000392_280 Hb_000392_280 Hb_007111_040--Hb_000392_280 Hb_000300_540 Hb_000300_540 Hb_007111_040--Hb_000300_540 Hb_006029_010 Hb_006029_010 Hb_007111_040--Hb_006029_010 Hb_000684_180 Hb_000684_180 Hb_007111_040--Hb_000684_180 Hb_079326_010 Hb_079326_010 Hb_011644_020--Hb_079326_010 Hb_011644_020--Hb_000684_180 Hb_000540_140 Hb_000540_140 Hb_011644_020--Hb_000540_140 Hb_023226_060 Hb_023226_060 Hb_011644_020--Hb_023226_060 Hb_001195_030 Hb_001195_030 Hb_011644_020--Hb_001195_030 Hb_000608_340 Hb_000608_340 Hb_019871_020--Hb_000608_340 Hb_001582_030 Hb_001582_030 Hb_019871_020--Hb_001582_030 Hb_006173_020 Hb_006173_020 Hb_019871_020--Hb_006173_020 Hb_004531_090 Hb_004531_090 Hb_019871_020--Hb_004531_090 Hb_000185_090 Hb_000185_090 Hb_019871_020--Hb_000185_090 Hb_000940_040 Hb_000940_040 Hb_019871_020--Hb_000940_040 Hb_000363_340 Hb_000363_340 Hb_000392_280--Hb_000363_340 Hb_000173_210 Hb_000173_210 Hb_000392_280--Hb_000173_210 Hb_000392_280--Hb_000300_540 Hb_002025_140 Hb_002025_140 Hb_000392_280--Hb_002025_140 Hb_000392_280--Hb_019871_020 Hb_003581_110 Hb_003581_110 Hb_000392_280--Hb_003581_110 Hb_007786_010 Hb_007786_010 Hb_000300_540--Hb_007786_010 Hb_004032_460 Hb_004032_460 Hb_000300_540--Hb_004032_460 Hb_000062_230 Hb_000062_230 Hb_000300_540--Hb_000062_230 Hb_002172_030 Hb_002172_030 Hb_000300_540--Hb_002172_030 Hb_000300_540--Hb_000363_340 Hb_000173_370 Hb_000173_370 Hb_000300_540--Hb_000173_370 Hb_000161_030 Hb_000161_030 Hb_006029_010--Hb_000161_030 Hb_004156_060 Hb_004156_060 Hb_006029_010--Hb_004156_060 Hb_000491_080 Hb_000491_080 Hb_006029_010--Hb_000491_080 Hb_006029_010--Hb_007786_010 Hb_182026_010 Hb_182026_010 Hb_006029_010--Hb_182026_010 Hb_000733_060 Hb_000733_060 Hb_006029_010--Hb_000733_060 Hb_000573_040 Hb_000573_040 Hb_000684_180--Hb_000573_040 Hb_000631_150 Hb_000631_150 Hb_000684_180--Hb_000631_150 Hb_003352_050 Hb_003352_050 Hb_000684_180--Hb_003352_050 Hb_000134_360 Hb_000134_360 Hb_000684_180--Hb_000134_360 Hb_000684_180--Hb_001195_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
157.924 24.1213 23.9493 27.8089 251.552 219.385
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
80.1744 54.9346 54.9153 26.6574 8.44331

CAGE analysis