Hb_000392_280

Information

Type -
Description -
Location Contig392: 250722-251444
Sequence    

Annotation

kegg
ID rcu:RCOM_1514760
description enzyme inhibitor, putative
nr
ID XP_012080239.1
description PREDICTED: pectinesterase 3 [Jatropha curcas]
swissprot
ID Q9LUL8
description Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1
trembl
ID A0A067K563
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11608 PE=4 SV=1
Gene Ontology
ID GO:0004857
description pectinesterase pectinesterase inhibitor 26

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000392_280 0.0 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
2 Hb_000363_340 0.0824152423 - - PREDICTED: syntaxin-52-like isoform X2 [Jatropha curcas]
3 Hb_000173_210 0.0897577357 - - PREDICTED: serine incorporator 3 [Jatropha curcas]
4 Hb_000300_540 0.0969365638 - - PREDICTED: syntaxin-132 [Jatropha curcas]
5 Hb_002025_140 0.096997307 - - PREDICTED: UBX domain-containing protein 2 isoform X1 [Jatropha curcas]
6 Hb_019871_020 0.0981540325 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
7 Hb_003581_110 0.0983694983 - - PREDICTED: uncharacterized protein LOC105649778 isoform X2 [Jatropha curcas]
8 Hb_001016_060 0.0994031547 - - conserved hypothetical protein [Ricinus communis]
9 Hb_007111_040 0.1008623916 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
10 Hb_000173_370 0.1017950419 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Jatropha curcas]
11 Hb_007534_040 0.1033580333 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
12 Hb_009801_010 0.1042333462 - - ATPase inhibitor, putative [Ricinus communis]
13 Hb_007757_100 0.1051993379 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
14 Hb_004531_090 0.1056073289 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
15 Hb_005725_070 0.1064052397 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004032_460 0.1067112038 - - -
17 Hb_000025_750 0.1109658737 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
18 Hb_000768_030 0.1137802199 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
19 Hb_002276_190 0.1141426963 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
20 Hb_179511_010 0.1147448977 - - -

Gene co-expression network

sample Hb_000392_280 Hb_000392_280 Hb_000363_340 Hb_000363_340 Hb_000392_280--Hb_000363_340 Hb_000173_210 Hb_000173_210 Hb_000392_280--Hb_000173_210 Hb_000300_540 Hb_000300_540 Hb_000392_280--Hb_000300_540 Hb_002025_140 Hb_002025_140 Hb_000392_280--Hb_002025_140 Hb_019871_020 Hb_019871_020 Hb_000392_280--Hb_019871_020 Hb_003581_110 Hb_003581_110 Hb_000392_280--Hb_003581_110 Hb_001016_060 Hb_001016_060 Hb_000363_340--Hb_001016_060 Hb_012977_010 Hb_012977_010 Hb_000363_340--Hb_012977_010 Hb_005725_070 Hb_005725_070 Hb_000363_340--Hb_005725_070 Hb_001498_030 Hb_001498_030 Hb_000363_340--Hb_001498_030 Hb_000363_340--Hb_000300_540 Hb_000173_370 Hb_000173_370 Hb_000173_210--Hb_000173_370 Hb_002897_040 Hb_002897_040 Hb_000173_210--Hb_002897_040 Hb_000619_070 Hb_000619_070 Hb_000173_210--Hb_000619_070 Hb_006631_010 Hb_006631_010 Hb_000173_210--Hb_006631_010 Hb_035360_010 Hb_035360_010 Hb_000173_210--Hb_035360_010 Hb_007786_010 Hb_007786_010 Hb_000300_540--Hb_007786_010 Hb_004032_460 Hb_004032_460 Hb_000300_540--Hb_004032_460 Hb_000062_230 Hb_000062_230 Hb_000300_540--Hb_000062_230 Hb_002172_030 Hb_002172_030 Hb_000300_540--Hb_002172_030 Hb_000300_540--Hb_000173_370 Hb_000573_040 Hb_000573_040 Hb_002025_140--Hb_000573_040 Hb_004531_090 Hb_004531_090 Hb_002025_140--Hb_004531_090 Hb_000165_130 Hb_000165_130 Hb_002025_140--Hb_000165_130 Hb_002025_140--Hb_000173_370 Hb_003216_110 Hb_003216_110 Hb_002025_140--Hb_003216_110 Hb_004032_350 Hb_004032_350 Hb_002025_140--Hb_004032_350 Hb_000608_340 Hb_000608_340 Hb_019871_020--Hb_000608_340 Hb_001582_030 Hb_001582_030 Hb_019871_020--Hb_001582_030 Hb_006173_020 Hb_006173_020 Hb_019871_020--Hb_006173_020 Hb_019871_020--Hb_004531_090 Hb_000185_090 Hb_000185_090 Hb_019871_020--Hb_000185_090 Hb_000940_040 Hb_000940_040 Hb_019871_020--Hb_000940_040 Hb_003581_110--Hb_001016_060 Hb_009801_010 Hb_009801_010 Hb_003581_110--Hb_009801_010 Hb_179511_010 Hb_179511_010 Hb_003581_110--Hb_179511_010 Hb_045502_010 Hb_045502_010 Hb_003581_110--Hb_045502_010 Hb_002405_020 Hb_002405_020 Hb_003581_110--Hb_002405_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
319.052 78.4608 61.985 44.0032 442.985 268.469
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
108.778 89.1687 71.0167 43.4222 15.0958

CAGE analysis