Hb_002151_050

Information

Type -
Description -
Location Contig2151: 57960-61173
Sequence    

Annotation

kegg
ID rcu:RCOM_0712310
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002516294.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9LUC5
description Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1
trembl
ID B9RRC5
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0712310 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 72a15-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002151_050 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_003913_080 0.1879444131 - - rpl27A [Hemiselmis andersenii]
3 Hb_012239_100 0.1888636051 - - hypothetical protein VITISV_043897 [Vitis vinifera]
4 Hb_002138_010 0.1949561552 - - hypothetical protein POPTR_0001s30620g [Populus trichocarpa]
5 Hb_036790_020 0.1956976794 - - PREDICTED: polyadenylate-binding protein 3 [Jatropha curcas]
6 Hb_000184_230 0.2009473197 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Jatropha curcas]
7 Hb_145084_010 0.2012765435 - - PREDICTED: uncharacterized protein LOC105646270 [Jatropha curcas]
8 Hb_004208_130 0.2016923497 - - hypothetical protein JCGZ_16532 [Jatropha curcas]
9 Hb_004291_010 0.2083764834 - - (R)-limonene synthase, putative [Ricinus communis]
10 Hb_002374_400 0.2122882332 transcription factor TF Family: TRAF protein with unknown function [Ricinus communis]
11 Hb_007218_100 0.2126643795 - - phosphofructokinase [Hevea brasiliensis]
12 Hb_000115_050 0.2131743935 - - -
13 Hb_007432_020 0.2182767085 - - hypothetical protein POPTR_0010s13310g [Populus trichocarpa]
14 Hb_004931_100 0.2204397477 - - Actin depolymerizing factor 6 isoform 1 [Theobroma cacao]
15 Hb_002609_060 0.2213162883 - - PREDICTED: sugar transport protein 8-like [Jatropha curcas]
16 Hb_000161_150 0.2231679684 - - PREDICTED: protein argonaute 2-like [Jatropha curcas]
17 Hb_000316_020 0.2283153661 - - protein binding protein, putative [Ricinus communis]
18 Hb_001096_030 0.2313041618 - - uridylate kinase plant, putative [Ricinus communis]
19 Hb_002067_100 0.231535384 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001579_140 0.2332890473 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002151_050 Hb_002151_050 Hb_003913_080 Hb_003913_080 Hb_002151_050--Hb_003913_080 Hb_012239_100 Hb_012239_100 Hb_002151_050--Hb_012239_100 Hb_002138_010 Hb_002138_010 Hb_002151_050--Hb_002138_010 Hb_036790_020 Hb_036790_020 Hb_002151_050--Hb_036790_020 Hb_000184_230 Hb_000184_230 Hb_002151_050--Hb_000184_230 Hb_145084_010 Hb_145084_010 Hb_002151_050--Hb_145084_010 Hb_000161_150 Hb_000161_150 Hb_003913_080--Hb_000161_150 Hb_001776_170 Hb_001776_170 Hb_003913_080--Hb_001776_170 Hb_004064_020 Hb_004064_020 Hb_003913_080--Hb_004064_020 Hb_005671_020 Hb_005671_020 Hb_003913_080--Hb_005671_020 Hb_000010_410 Hb_000010_410 Hb_003913_080--Hb_000010_410 Hb_009838_040 Hb_009838_040 Hb_012239_100--Hb_009838_040 Hb_000215_180 Hb_000215_180 Hb_012239_100--Hb_000215_180 Hb_005000_160 Hb_005000_160 Hb_012239_100--Hb_005000_160 Hb_001579_140 Hb_001579_140 Hb_012239_100--Hb_001579_140 Hb_000432_050 Hb_000432_050 Hb_012239_100--Hb_000432_050 Hb_001538_140 Hb_001538_140 Hb_012239_100--Hb_001538_140 Hb_002374_400 Hb_002374_400 Hb_002138_010--Hb_002374_400 Hb_000003_270 Hb_000003_270 Hb_002138_010--Hb_000003_270 Hb_001832_120 Hb_001832_120 Hb_002138_010--Hb_001832_120 Hb_000742_110 Hb_000742_110 Hb_002138_010--Hb_000742_110 Hb_007181_070 Hb_007181_070 Hb_002138_010--Hb_007181_070 Hb_003209_200 Hb_003209_200 Hb_002138_010--Hb_003209_200 Hb_003972_080 Hb_003972_080 Hb_036790_020--Hb_003972_080 Hb_189216_030 Hb_189216_030 Hb_036790_020--Hb_189216_030 Hb_001638_230 Hb_001638_230 Hb_036790_020--Hb_001638_230 Hb_003462_120 Hb_003462_120 Hb_036790_020--Hb_003462_120 Hb_002217_230 Hb_002217_230 Hb_036790_020--Hb_002217_230 Hb_005285_030 Hb_005285_030 Hb_036790_020--Hb_005285_030 Hb_007218_070 Hb_007218_070 Hb_000184_230--Hb_007218_070 Hb_000614_170 Hb_000614_170 Hb_000184_230--Hb_000614_170 Hb_007432_020 Hb_007432_020 Hb_000184_230--Hb_007432_020 Hb_000563_190 Hb_000563_190 Hb_000184_230--Hb_000563_190 Hb_005873_010 Hb_005873_010 Hb_000184_230--Hb_005873_010 Hb_000184_230--Hb_002217_230 Hb_002609_060 Hb_002609_060 Hb_145084_010--Hb_002609_060 Hb_000363_200 Hb_000363_200 Hb_145084_010--Hb_000363_200 Hb_000907_170 Hb_000907_170 Hb_145084_010--Hb_000907_170 Hb_001863_090 Hb_001863_090 Hb_145084_010--Hb_001863_090 Hb_003097_210 Hb_003097_210 Hb_145084_010--Hb_003097_210 Hb_001016_090 Hb_001016_090 Hb_145084_010--Hb_001016_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0837083 0.0845467 0.117343 0.0852219 0.0108743 0.0885853
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.739837 0.727615 0.785191 0.720615 0

CAGE analysis