Hb_002086_030

Information

Type -
Description -
Location Contig2086: 82536-87153
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_007220718.1
description hypothetical protein PRUPE_ppa022673mg [Prunus persica]
swissprot
ID Q99315
description Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID GO:0005488
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002086_030 0.0 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
2 Hb_000869_030 0.1859264512 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR5 isoform X1 [Jatropha curcas]
3 Hb_009372_010 0.1966292575 - - -
4 Hb_128695_030 0.1986945364 - - heat shock protein, putative [Ricinus communis]
5 Hb_001231_080 0.2002293202 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Fragaria vesca subsp. vesca]
6 Hb_002485_040 0.2025353053 - - PREDICTED: uncharacterized protein LOC105637426 [Jatropha curcas]
7 Hb_153161_010 0.2108293286 - - phospholipid-transporting atpase, putative [Ricinus communis]
8 Hb_001565_020 0.2182051818 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial, partial [Jatropha curcas]
9 Hb_002942_110 0.2182818702 transcription factor TF Family: ARF PREDICTED: auxin response factor 2-like [Jatropha curcas]
10 Hb_007416_190 0.2192561314 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
11 Hb_020178_050 0.2193223657 desease resistance Gene Name: RPW8 PREDICTED: probable disease resistance protein At4g33300 [Jatropha curcas]
12 Hb_000940_160 0.2199090793 - - hypothetical protein VITISV_017596 [Vitis vinifera]
13 Hb_002774_150 0.2213488134 - - PREDICTED: F-box protein At1g22220 [Jatropha curcas]
14 Hb_011791_020 0.2223496159 - - hypothetical protein Csa_6G486930 [Cucumis sativus]
15 Hb_002805_130 0.2233787709 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003506_070 0.225747231 - - PREDICTED: calcineurin B-like protein 7 isoform X2 [Jatropha curcas]
17 Hb_011885_010 0.2268902103 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
18 Hb_178127_010 0.2281191018 - - Ubiquitin ligase SINAT3, putative [Ricinus communis]
19 Hb_001114_230 0.2294620792 - - -
20 Hb_000123_350 0.2301942545 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_002086_030 Hb_002086_030 Hb_000869_030 Hb_000869_030 Hb_002086_030--Hb_000869_030 Hb_009372_010 Hb_009372_010 Hb_002086_030--Hb_009372_010 Hb_128695_030 Hb_128695_030 Hb_002086_030--Hb_128695_030 Hb_001231_080 Hb_001231_080 Hb_002086_030--Hb_001231_080 Hb_002485_040 Hb_002485_040 Hb_002086_030--Hb_002485_040 Hb_153161_010 Hb_153161_010 Hb_002086_030--Hb_153161_010 Hb_002073_280 Hb_002073_280 Hb_000869_030--Hb_002073_280 Hb_000869_030--Hb_128695_030 Hb_012082_010 Hb_012082_010 Hb_000869_030--Hb_012082_010 Hb_003895_020 Hb_003895_020 Hb_000869_030--Hb_003895_020 Hb_003992_180 Hb_003992_180 Hb_000869_030--Hb_003992_180 Hb_000086_050 Hb_000086_050 Hb_000869_030--Hb_000086_050 Hb_028795_010 Hb_028795_010 Hb_009372_010--Hb_028795_010 Hb_001114_230 Hb_001114_230 Hb_009372_010--Hb_001114_230 Hb_021576_140 Hb_021576_140 Hb_009372_010--Hb_021576_140 Hb_007481_030 Hb_007481_030 Hb_009372_010--Hb_007481_030 Hb_009372_010--Hb_153161_010 Hb_003633_140 Hb_003633_140 Hb_009372_010--Hb_003633_140 Hb_000056_300 Hb_000056_300 Hb_128695_030--Hb_000056_300 Hb_178127_010 Hb_178127_010 Hb_128695_030--Hb_178127_010 Hb_001565_020 Hb_001565_020 Hb_128695_030--Hb_001565_020 Hb_002942_110 Hb_002942_110 Hb_128695_030--Hb_002942_110 Hb_005054_310 Hb_005054_310 Hb_128695_030--Hb_005054_310 Hb_000836_370 Hb_000836_370 Hb_128695_030--Hb_000836_370 Hb_001231_080--Hb_000836_370 Hb_005000_300 Hb_005000_300 Hb_001231_080--Hb_005000_300 Hb_001231_080--Hb_000056_300 Hb_001231_080--Hb_002942_110 Hb_001231_080--Hb_128695_030 Hb_004195_120 Hb_004195_120 Hb_001231_080--Hb_004195_120 Hb_000123_350 Hb_000123_350 Hb_002485_040--Hb_000123_350 Hb_002485_040--Hb_012082_010 Hb_001865_060 Hb_001865_060 Hb_002485_040--Hb_001865_060 Hb_002774_150 Hb_002774_150 Hb_002485_040--Hb_002774_150 Hb_125126_010 Hb_125126_010 Hb_002485_040--Hb_125126_010 Hb_000896_060 Hb_000896_060 Hb_002485_040--Hb_000896_060 Hb_153161_010--Hb_001565_020 Hb_153161_010--Hb_178127_010 Hb_153161_010--Hb_128695_030 Hb_021530_010 Hb_021530_010 Hb_153161_010--Hb_021530_010 Hb_003096_040 Hb_003096_040 Hb_153161_010--Hb_003096_040 Hb_153161_010--Hb_002942_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0267957 0.11273 0.0356137 0.00689961 0.0231849 0.0368761
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0160778 0.0132588 0.0179396

CAGE analysis