Hb_001512_020

Information

Type -
Description -
Location Contig1512: 14800-18687
Sequence    

Annotation

kegg
ID rcu:RCOM_1065230
description Esterase precursor, putative
nr
ID XP_012071792.1
description PREDICTED: GDSL esterase/lipase At5g14450 [Jatropha curcas]
swissprot
ID Q9LY84
description GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1
trembl
ID A0A067LPE6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10234 PE=4 SV=1
Gene Ontology
ID GO:0009505
description gdsl esterase lipase at5g14450-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001512_020 0.0 - - PREDICTED: GDSL esterase/lipase At5g14450 [Jatropha curcas]
2 Hb_004052_010 0.2848677648 - - PREDICTED: ninja-family protein AFP3-like isoform X2 [Jatropha curcas]
3 Hb_028977_020 0.3033820497 - - hypothetical protein JCGZ_21319 [Jatropha curcas]
4 Hb_001195_540 0.3086303364 - - PREDICTED: J domain-containing protein required for chloroplast accumulation response 1 [Jatropha curcas]
5 Hb_001087_020 0.3138182868 - - PREDICTED: phytoene synthase 2, chloroplastic-like [Jatropha curcas]
6 Hb_001238_050 0.3218564222 - - -
7 Hb_000094_130 0.3311581284 - - PREDICTED: random slug protein 5 [Jatropha curcas]
8 Hb_000157_040 0.3344769974 - - PREDICTED: cycloartenol-C-24-methyltransferase [Jatropha curcas]
9 Hb_003849_100 0.3358556845 - - PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Populus euphratica]
10 Hb_004324_050 0.3364826063 - - PREDICTED: spermine synthase [Jatropha curcas]
11 Hb_000120_120 0.3414095289 - - PREDICTED: phosphoinositide phospholipase C 2 [Jatropha curcas]
12 Hb_114893_020 0.3422243195 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_000130_370 0.344358699 - - PREDICTED: uncharacterized protein LOC105635737 [Jatropha curcas]
14 Hb_012508_040 0.3467159913 - - hypothetical protein POPTR_0006s08460g [Populus trichocarpa]
15 Hb_000186_340 0.3469022412 - - hypothetical protein POPTR_0011s01440g [Populus trichocarpa]
16 Hb_001277_090 0.3472212838 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
17 Hb_001587_070 0.3477524781 desease resistance Gene Name: NB-ARC Nbs-lrr resistance protein, putative [Theobroma cacao]
18 Hb_150651_050 0.3484368417 - - phosphoglycerate mutase, putative [Ricinus communis]
19 Hb_000344_060 0.3499041618 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
20 Hb_002073_140 0.3521616943 - - -

Gene co-expression network

sample Hb_001512_020 Hb_001512_020 Hb_004052_010 Hb_004052_010 Hb_001512_020--Hb_004052_010 Hb_028977_020 Hb_028977_020 Hb_001512_020--Hb_028977_020 Hb_001195_540 Hb_001195_540 Hb_001512_020--Hb_001195_540 Hb_001087_020 Hb_001087_020 Hb_001512_020--Hb_001087_020 Hb_001238_050 Hb_001238_050 Hb_001512_020--Hb_001238_050 Hb_000094_130 Hb_000094_130 Hb_001512_020--Hb_000094_130 Hb_001277_090 Hb_001277_090 Hb_004052_010--Hb_001277_090 Hb_000141_030 Hb_000141_030 Hb_004052_010--Hb_000141_030 Hb_000172_570 Hb_000172_570 Hb_004052_010--Hb_000172_570 Hb_006153_080 Hb_006153_080 Hb_004052_010--Hb_006153_080 Hb_005569_020 Hb_005569_020 Hb_004052_010--Hb_005569_020 Hb_000712_050 Hb_000712_050 Hb_004052_010--Hb_000712_050 Hb_002073_140 Hb_002073_140 Hb_028977_020--Hb_002073_140 Hb_000120_120 Hb_000120_120 Hb_028977_020--Hb_000120_120 Hb_150651_050 Hb_150651_050 Hb_028977_020--Hb_150651_050 Hb_027892_010 Hb_027892_010 Hb_028977_020--Hb_027892_010 Hb_000249_090 Hb_000249_090 Hb_028977_020--Hb_000249_090 Hb_001267_030 Hb_001267_030 Hb_028977_020--Hb_001267_030 Hb_002259_010 Hb_002259_010 Hb_001195_540--Hb_002259_010 Hb_001195_540--Hb_001087_020 Hb_007904_140 Hb_007904_140 Hb_001195_540--Hb_007904_140 Hb_005539_120 Hb_005539_120 Hb_001195_540--Hb_005539_120 Hb_008768_030 Hb_008768_030 Hb_001195_540--Hb_008768_030 Hb_000032_300 Hb_000032_300 Hb_001087_020--Hb_000032_300 Hb_001087_020--Hb_007904_140 Hb_100804_010 Hb_100804_010 Hb_001087_020--Hb_100804_010 Hb_000085_080 Hb_000085_080 Hb_001087_020--Hb_000085_080 Hb_004306_070 Hb_004306_070 Hb_001238_050--Hb_004306_070 Hb_000424_250 Hb_000424_250 Hb_001238_050--Hb_000424_250 Hb_000162_040 Hb_000162_040 Hb_001238_050--Hb_000162_040 Hb_034482_020 Hb_034482_020 Hb_001238_050--Hb_034482_020 Hb_000326_040 Hb_000326_040 Hb_001238_050--Hb_000326_040 Hb_000816_130 Hb_000816_130 Hb_001238_050--Hb_000816_130 Hb_005188_090 Hb_005188_090 Hb_000094_130--Hb_005188_090 Hb_000327_220 Hb_000327_220 Hb_000094_130--Hb_000327_220 Hb_004410_100 Hb_004410_100 Hb_000094_130--Hb_004410_100 Hb_000094_130--Hb_001277_090 Hb_000236_140 Hb_000236_140 Hb_000094_130--Hb_000236_140 Hb_005043_010 Hb_005043_010 Hb_000094_130--Hb_005043_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0280569 0 0.0539368 0.0111903 0.0140566 0.042318
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.12786 0 0.18884 0.0200814 0

CAGE analysis