Hb_008768_030

Information

Type -
Description -
Location Contig8768: 24926-34085
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008768_030 0.0 - - -
2 Hb_007904_140 0.2265411508 - - -
3 Hb_015322_040 0.2513739055 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
4 Hb_001534_010 0.2518943119 - - Alpha-expansin 3 precursor [Theobroma cacao]
5 Hb_000098_320 0.2563288692 - - -
6 Hb_001243_010 0.2613713476 - - PREDICTED: dirigent protein 4-like [Populus euphratica]
7 Hb_000008_180 0.2805249642 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000230_320 0.2851295799 - - PREDICTED: AP-5 complex subunit mu-like [Nelumbo nucifera]
9 Hb_012253_010 0.2971114784 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
10 Hb_150751_010 0.3046658042 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
11 Hb_174876_010 0.3284671244 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
12 Hb_064885_080 0.3322933478 - - -
13 Hb_000510_020 0.3453074599 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
14 Hb_144451_010 0.3453084194 - - hypothetical protein VITISV_001808 [Vitis vinifera]
15 Hb_002893_160 0.3453174873 - - peptidase, putative [Ricinus communis]
16 Hb_010896_020 0.3453179482 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_000521_010 0.345332025 - - PREDICTED: protein UPSTREAM OF FLC [Jatropha curcas]
18 Hb_062562_010 0.3454451185 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
19 Hb_110559_010 0.3459236632 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
20 Hb_001357_070 0.3460579851 - - hypothetical protein CISIN_1g0004672mg, partial [Citrus sinensis]

Gene co-expression network

sample Hb_008768_030 Hb_008768_030 Hb_007904_140 Hb_007904_140 Hb_008768_030--Hb_007904_140 Hb_015322_040 Hb_015322_040 Hb_008768_030--Hb_015322_040 Hb_001534_010 Hb_001534_010 Hb_008768_030--Hb_001534_010 Hb_000098_320 Hb_000098_320 Hb_008768_030--Hb_000098_320 Hb_001243_010 Hb_001243_010 Hb_008768_030--Hb_001243_010 Hb_000008_180 Hb_000008_180 Hb_008768_030--Hb_000008_180 Hb_110559_010 Hb_110559_010 Hb_007904_140--Hb_110559_010 Hb_001357_070 Hb_001357_070 Hb_007904_140--Hb_001357_070 Hb_062562_010 Hb_062562_010 Hb_007904_140--Hb_062562_010 Hb_000521_010 Hb_000521_010 Hb_007904_140--Hb_000521_010 Hb_144451_010 Hb_144451_010 Hb_007904_140--Hb_144451_010 Hb_015322_040--Hb_001534_010 Hb_015322_040--Hb_000098_320 Hb_015322_040--Hb_001243_010 Hb_015322_040--Hb_000008_180 Hb_000230_320 Hb_000230_320 Hb_015322_040--Hb_000230_320 Hb_064885_080 Hb_064885_080 Hb_015322_040--Hb_064885_080 Hb_001534_010--Hb_000098_320 Hb_001534_010--Hb_001243_010 Hb_001534_010--Hb_000008_180 Hb_001534_010--Hb_000230_320 Hb_001534_010--Hb_064885_080 Hb_000098_320--Hb_001243_010 Hb_000098_320--Hb_000008_180 Hb_000098_320--Hb_000230_320 Hb_011640_030 Hb_011640_030 Hb_000098_320--Hb_011640_030 Hb_001243_010--Hb_000230_320 Hb_001243_010--Hb_000008_180 Hb_001243_010--Hb_110559_010 Hb_000008_180--Hb_000230_320 Hb_000008_180--Hb_064885_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.00917323
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0238237 0 0.0354981 0.00746108 0

CAGE analysis