Hb_064885_080

Information

Type -
Description -
Location Contig64885: 63282-65370
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064885_080 0.0 - - -
2 Hb_001114_340 0.1090349437 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
3 Hb_010174_070 0.16379429 - - -
4 Hb_001842_130 0.2026864444 - - conserved hypothetical protein [Ricinus communis]
5 Hb_179520_010 0.203797973 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
6 Hb_000230_320 0.2166892471 - - PREDICTED: AP-5 complex subunit mu-like [Nelumbo nucifera]
7 Hb_000995_070 0.2195308343 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
8 Hb_108528_010 0.2212351712 - - unnamed protein product [Coffea canephora]
9 Hb_000008_180 0.225146951 - - conserved hypothetical protein [Ricinus communis]
10 Hb_015322_040 0.2266263561 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
11 Hb_003913_140 0.2319359304 - - PREDICTED: uncharacterized protein LOC105640324 [Jatropha curcas]
12 Hb_000042_240 0.2319832683 - - -
13 Hb_001534_010 0.2337153844 - - Alpha-expansin 3 precursor [Theobroma cacao]
14 Hb_001243_010 0.2354065889 - - PREDICTED: dirigent protein 4-like [Populus euphratica]
15 Hb_042223_010 0.2355719565 - - Protein Z, putative [Ricinus communis]
16 Hb_001902_120 0.2392449303 - - PREDICTED: uncharacterized protein LOC105648455 isoform X2 [Jatropha curcas]
17 Hb_000098_320 0.2498785634 - - -
18 Hb_000227_200 0.2561495533 - - PREDICTED: protein FANTASTIC FOUR 3 [Populus euphratica]
19 Hb_001741_040 0.2581854137 rubber biosynthesis Gene Name: REF3 REF-like stress related protein 1 [Hevea brasiliensis]
20 Hb_100873_030 0.2607471463 - - PREDICTED: uncharacterized protein LOC105795653 [Gossypium raimondii]

Gene co-expression network

sample Hb_064885_080 Hb_064885_080 Hb_001114_340 Hb_001114_340 Hb_064885_080--Hb_001114_340 Hb_010174_070 Hb_010174_070 Hb_064885_080--Hb_010174_070 Hb_001842_130 Hb_001842_130 Hb_064885_080--Hb_001842_130 Hb_179520_010 Hb_179520_010 Hb_064885_080--Hb_179520_010 Hb_000230_320 Hb_000230_320 Hb_064885_080--Hb_000230_320 Hb_000995_070 Hb_000995_070 Hb_064885_080--Hb_000995_070 Hb_001114_340--Hb_000995_070 Hb_001114_340--Hb_010174_070 Hb_100873_030 Hb_100873_030 Hb_001114_340--Hb_100873_030 Hb_042223_010 Hb_042223_010 Hb_001114_340--Hb_042223_010 Hb_000784_040 Hb_000784_040 Hb_001114_340--Hb_000784_040 Hb_010174_070--Hb_179520_010 Hb_108528_010 Hb_108528_010 Hb_010174_070--Hb_108528_010 Hb_001902_120 Hb_001902_120 Hb_010174_070--Hb_001902_120 Hb_004064_020 Hb_004064_020 Hb_010174_070--Hb_004064_020 Hb_001842_130--Hb_179520_010 Hb_001842_130--Hb_108528_010 Hb_001842_130--Hb_010174_070 Hb_009644_040 Hb_009644_040 Hb_001842_130--Hb_009644_040 Hb_001842_130--Hb_004064_020 Hb_179520_010--Hb_108528_010 Hb_000720_190 Hb_000720_190 Hb_179520_010--Hb_000720_190 Hb_179520_010--Hb_001902_120 Hb_179520_010--Hb_004064_020 Hb_000008_180 Hb_000008_180 Hb_000230_320--Hb_000008_180 Hb_015322_040 Hb_015322_040 Hb_000230_320--Hb_015322_040 Hb_001243_010 Hb_001243_010 Hb_000230_320--Hb_001243_010 Hb_001534_010 Hb_001534_010 Hb_000230_320--Hb_001534_010 Hb_000098_320 Hb_000098_320 Hb_000230_320--Hb_000098_320 Hb_000995_070--Hb_100873_030 Hb_000995_070--Hb_000784_040 Hb_002073_120 Hb_002073_120 Hb_000995_070--Hb_002073_120 Hb_000172_570 Hb_000172_570 Hb_000995_070--Hb_000172_570 Hb_010417_010 Hb_010417_010 Hb_000995_070--Hb_010417_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.374313 0.126164 0.849004 0.118513 0

CAGE analysis