Hb_001214_060

Information

Type -
Description -
Location Contig1214: 55872-65823
Sequence    

Annotation

kegg
ID rcu:RCOM_0186800
description suppressor of actin, putative
nr
ID XP_012087831.1
description PREDICTED: phosphoinositide phosphatase SAC8 [Jatropha curcas]
swissprot
ID Q96328
description Phosphoinositide phosphatase SAC8 OS=Arabidopsis thaliana GN=SAC8 PE=2 SV=1
trembl
ID A0A067JWP0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24994 PE=4 SV=1
Gene Ontology
ID GO:0052866
description phosphoinositide phosphatase sac8 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06550: 55954-56862 , PASA_asmbl_06551: 56875-57357 , PASA_asmbl_06552: 58452-64743 , PASA_asmbl_06553: 64754-65779
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001214_060 0.0 - - PREDICTED: phosphoinositide phosphatase SAC8 [Jatropha curcas]
2 Hb_000302_310 0.0677920276 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
3 Hb_033834_030 0.0709972972 - - PREDICTED: nucleolar complex protein 2 homolog isoform X1 [Jatropha curcas]
4 Hb_005730_120 0.0733782578 - - PREDICTED: protein WHI4 [Jatropha curcas]
5 Hb_000020_150 0.0763543388 - - PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
6 Hb_001599_040 0.0763642435 - - PREDICTED: suppressor protein SRP40 isoform X2 [Jatropha curcas]
7 Hb_002175_030 0.0790824419 - - PREDICTED: snRNA-activating protein complex subunit isoform X2 [Jatropha curcas]
8 Hb_000126_010 0.0822072082 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X1 [Jatropha curcas]
9 Hb_000334_280 0.0827118713 - - PREDICTED: protein FRA10AC1 [Jatropha curcas]
10 Hb_005618_050 0.0829613355 - - PREDICTED: charged multivesicular body protein 7 isoform X1 [Jatropha curcas]
11 Hb_002110_230 0.0848948891 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
12 Hb_000640_170 0.0853643351 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
13 Hb_007576_080 0.0858213032 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]
14 Hb_000035_470 0.0860355735 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
15 Hb_001357_150 0.0862188043 - - hypothetical protein POPTR_0011s08930g [Populus trichocarpa]
16 Hb_000120_430 0.0887514586 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
17 Hb_000521_120 0.0889215896 - - PREDICTED: cyclic pyranopterin monophosphate synthase, mitochondrial isoform X1 [Jatropha curcas]
18 Hb_000484_030 0.089316315 - - PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Jatropha curcas]
19 Hb_000163_220 0.0897388793 - - hypothetical protein CISIN_1g022301mg [Citrus sinensis]
20 Hb_002303_070 0.0902241867 - - PREDICTED: uncharacterized RNA-binding protein C1827.05c [Jatropha curcas]

Gene co-expression network

sample Hb_001214_060 Hb_001214_060 Hb_000302_310 Hb_000302_310 Hb_001214_060--Hb_000302_310 Hb_033834_030 Hb_033834_030 Hb_001214_060--Hb_033834_030 Hb_005730_120 Hb_005730_120 Hb_001214_060--Hb_005730_120 Hb_000020_150 Hb_000020_150 Hb_001214_060--Hb_000020_150 Hb_001599_040 Hb_001599_040 Hb_001214_060--Hb_001599_040 Hb_002175_030 Hb_002175_030 Hb_001214_060--Hb_002175_030 Hb_002681_090 Hb_002681_090 Hb_000302_310--Hb_002681_090 Hb_001860_030 Hb_001860_030 Hb_000302_310--Hb_001860_030 Hb_000035_470 Hb_000035_470 Hb_000302_310--Hb_000035_470 Hb_004319_080 Hb_004319_080 Hb_000302_310--Hb_004319_080 Hb_000163_220 Hb_000163_220 Hb_000302_310--Hb_000163_220 Hb_001051_080 Hb_001051_080 Hb_033834_030--Hb_001051_080 Hb_001143_180 Hb_001143_180 Hb_033834_030--Hb_001143_180 Hb_005337_090 Hb_005337_090 Hb_033834_030--Hb_005337_090 Hb_033834_030--Hb_002175_030 Hb_000120_430 Hb_000120_430 Hb_033834_030--Hb_000120_430 Hb_033834_030--Hb_000020_150 Hb_005271_220 Hb_005271_220 Hb_005730_120--Hb_005271_220 Hb_032808_010 Hb_032808_010 Hb_005730_120--Hb_032808_010 Hb_002303_070 Hb_002303_070 Hb_005730_120--Hb_002303_070 Hb_005730_120--Hb_001599_040 Hb_004453_130 Hb_004453_130 Hb_005730_120--Hb_004453_130 Hb_002311_180 Hb_002311_180 Hb_005730_120--Hb_002311_180 Hb_028872_090 Hb_028872_090 Hb_000020_150--Hb_028872_090 Hb_000020_150--Hb_000120_430 Hb_063716_100 Hb_063716_100 Hb_000020_150--Hb_063716_100 Hb_000221_250 Hb_000221_250 Hb_000020_150--Hb_000221_250 Hb_183612_040 Hb_183612_040 Hb_000020_150--Hb_183612_040 Hb_001599_040--Hb_002303_070 Hb_001946_400 Hb_001946_400 Hb_001599_040--Hb_001946_400 Hb_006831_140 Hb_006831_140 Hb_001599_040--Hb_006831_140 Hb_000640_170 Hb_000640_170 Hb_001599_040--Hb_000640_170 Hb_007390_010 Hb_007390_010 Hb_001599_040--Hb_007390_010 Hb_001433_070 Hb_001433_070 Hb_002175_030--Hb_001433_070 Hb_156973_010 Hb_156973_010 Hb_002175_030--Hb_156973_010 Hb_000853_230 Hb_000853_230 Hb_002175_030--Hb_000853_230 Hb_001089_110 Hb_001089_110 Hb_002175_030--Hb_001089_110 Hb_010068_040 Hb_010068_040 Hb_002175_030--Hb_010068_040 Hb_006620_020 Hb_006620_020 Hb_002175_030--Hb_006620_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.56803 4.29976 5.65092 7.01562 6.86933 6.71148
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.741 7.28211 2.82256 6.93559 3.99693

CAGE analysis