Hb_001205_250

Information

Type -
Description -
Location Contig1205: 171371-176745
Sequence    

Annotation

kegg
ID rcu:RCOM_0536300
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012084470.1
description PREDICTED: uncharacterized protein LOC105643856 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUJ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20030 PE=4 SV=1
Gene Ontology
ID GO:0016021
description aldehyde dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06355: 171489-176716 , PASA_asmbl_06356: 172205-172537
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001205_250 0.0 - - PREDICTED: uncharacterized protein LOC105643856 [Jatropha curcas]
2 Hb_001584_140 0.069733717 - - PREDICTED: uncharacterized protein LOC105647409 [Jatropha curcas]
3 Hb_001188_060 0.0749531058 - - -
4 Hb_000637_150 0.0828991116 - - Protein CASP, putative [Ricinus communis]
5 Hb_001188_070 0.0844977445 - - PREDICTED: protein disulfide-isomerase 5-1 [Jatropha curcas]
6 Hb_000915_260 0.0883809452 - - PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]
7 Hb_017700_010 0.0899622778 - - PREDICTED: probable protein S-acyltransferase 15 [Jatropha curcas]
8 Hb_002783_170 0.0914252539 - - PREDICTED: BRCA1-A complex subunit BRE isoform X2 [Jatropha curcas]
9 Hb_000317_470 0.0920887859 - - PREDICTED: CCR4-NOT transcription complex subunit 11 [Jatropha curcas]
10 Hb_001789_030 0.0937418483 - - PREDICTED: signal peptide peptidase-like 1 [Jatropha curcas]
11 Hb_001269_230 0.0937947395 - - PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Jatropha curcas]
12 Hb_001268_240 0.0944651749 - - PREDICTED: uncharacterized protein LOC105630174 isoform X2 [Jatropha curcas]
13 Hb_002073_190 0.0951192916 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
14 Hb_116349_070 0.0958378549 - - hypothetical protein JCGZ_21753 [Jatropha curcas]
15 Hb_000007_390 0.0961659769 - - hypothetical protein JCGZ_18250 [Jatropha curcas]
16 Hb_002375_040 0.0971342328 - - PREDICTED: 15 kDa selenoprotein [Jatropha curcas]
17 Hb_001089_070 0.0974787919 - - PREDICTED: conserved oligomeric Golgi complex subunit 3 [Jatropha curcas]
18 Hb_168978_030 0.0975216916 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 8 [Jatropha curcas]
19 Hb_000445_050 0.0978987441 - - PREDICTED: DNA topoisomerase 2-binding protein 1 [Jatropha curcas]
20 Hb_002276_170 0.0979539318 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001205_250 Hb_001205_250 Hb_001584_140 Hb_001584_140 Hb_001205_250--Hb_001584_140 Hb_001188_060 Hb_001188_060 Hb_001205_250--Hb_001188_060 Hb_000637_150 Hb_000637_150 Hb_001205_250--Hb_000637_150 Hb_001188_070 Hb_001188_070 Hb_001205_250--Hb_001188_070 Hb_000915_260 Hb_000915_260 Hb_001205_250--Hb_000915_260 Hb_017700_010 Hb_017700_010 Hb_001205_250--Hb_017700_010 Hb_001584_140--Hb_000637_150 Hb_000136_110 Hb_000136_110 Hb_001584_140--Hb_000136_110 Hb_000441_220 Hb_000441_220 Hb_001584_140--Hb_000441_220 Hb_001205_120 Hb_001205_120 Hb_001584_140--Hb_001205_120 Hb_001518_080 Hb_001518_080 Hb_001584_140--Hb_001518_080 Hb_001269_230 Hb_001269_230 Hb_001188_060--Hb_001269_230 Hb_000208_260 Hb_000208_260 Hb_001188_060--Hb_000208_260 Hb_001188_060--Hb_001584_140 Hb_002398_030 Hb_002398_030 Hb_001188_060--Hb_002398_030 Hb_002248_110 Hb_002248_110 Hb_001188_060--Hb_002248_110 Hb_001789_030 Hb_001789_030 Hb_000637_150--Hb_001789_030 Hb_000637_150--Hb_001518_080 Hb_000008_290 Hb_000008_290 Hb_000637_150--Hb_000008_290 Hb_005488_020 Hb_005488_020 Hb_000637_150--Hb_005488_020 Hb_011618_050 Hb_011618_050 Hb_001188_070--Hb_011618_050 Hb_001268_240 Hb_001268_240 Hb_001188_070--Hb_001268_240 Hb_024847_010 Hb_024847_010 Hb_001188_070--Hb_024847_010 Hb_005144_090 Hb_005144_090 Hb_001188_070--Hb_005144_090 Hb_002783_170 Hb_002783_170 Hb_001188_070--Hb_002783_170 Hb_009898_050 Hb_009898_050 Hb_000915_260--Hb_009898_050 Hb_002276_170 Hb_002276_170 Hb_000915_260--Hb_002276_170 Hb_001141_020 Hb_001141_020 Hb_000915_260--Hb_001141_020 Hb_168978_030 Hb_168978_030 Hb_000915_260--Hb_168978_030 Hb_006153_070 Hb_006153_070 Hb_000915_260--Hb_006153_070 Hb_000915_260--Hb_001205_120 Hb_058999_030 Hb_058999_030 Hb_017700_010--Hb_058999_030 Hb_001047_220 Hb_001047_220 Hb_017700_010--Hb_001047_220 Hb_003964_070 Hb_003964_070 Hb_017700_010--Hb_003964_070 Hb_000101_380 Hb_000101_380 Hb_017700_010--Hb_000101_380 Hb_000313_260 Hb_000313_260 Hb_017700_010--Hb_000313_260 Hb_003018_130 Hb_003018_130 Hb_017700_010--Hb_003018_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.8856 3.70193 11.4059 11.4736 12.7836 10.8958
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.52614 6.65396 7.20403 11.8746 7.58895

CAGE analysis