Hb_001019_200

Information

Type -
Description -
Location Contig1019: 257478-261345
Sequence    

Annotation

kegg
ID rcu:RCOM_0220690
description Leucine-rich repeat receptor protein kinase EXS precursor, putative (EC:2.7.11.25)
nr
ID XP_002524452.1
description Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SEN3
description Leucine-rich repeat receptor protein kinase EXS, putative OS=Ricinus communis GN=RCOM_0220690 PE=4 SV=1
Gene Ontology
ID GO:0004672
description leucine-rich repeat receptor protein kinase exs

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00945: 257665-257898
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001019_200 0.0 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
2 Hb_001352_090 0.1349344545 - - PREDICTED: UPF0161 protein At3g09310 [Jatropha curcas]
3 Hb_011609_050 0.1449765079 - - PREDICTED: KH domain-containing protein At4g18375-like isoform X1 [Jatropha curcas]
4 Hb_028900_010 0.1532331879 - - PREDICTED: uncharacterized protein LOC105631404 isoform X2 [Jatropha curcas]
5 Hb_003142_070 0.1550739192 - - hypothetical protein F383_14657 [Gossypium arboreum]
6 Hb_002374_280 0.1610794735 - - -
7 Hb_004976_020 0.1703965629 - - PREDICTED: probable nucleolar protein 5-1 [Jatropha curcas]
8 Hb_001213_130 0.174321865 - - PREDICTED: fructokinase-like 1, chloroplastic [Jatropha curcas]
9 Hb_000390_310 0.1754214653 - - PREDICTED: uncharacterized protein LOC105632456 isoform X2 [Jatropha curcas]
10 Hb_000014_170 0.1758748685 - - hypothetical protein CISIN_1g0379742mg, partial [Citrus sinensis]
11 Hb_000948_180 0.1759654241 - - PREDICTED: uncharacterized protein LOC105629501 [Jatropha curcas]
12 Hb_021422_010 0.1761256954 - - PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial [Jatropha curcas]
13 Hb_000181_120 0.1761540762 - - PREDICTED: PRA1 family protein H isoform X1 [Jatropha curcas]
14 Hb_000649_070 0.1779672255 - - PREDICTED: probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 [Jatropha curcas]
15 Hb_000003_290 0.1792340111 - - hypothetical protein JCGZ_24486 [Jatropha curcas]
16 Hb_000836_430 0.1799181988 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Jatropha curcas]
17 Hb_005016_090 0.1808843245 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
18 Hb_000032_490 0.1824645577 - - PREDICTED: uncharacterized protein At4g10930-like [Jatropha curcas]
19 Hb_003994_200 0.1827326864 - - PREDICTED: uncharacterized protein LOC105646142 [Jatropha curcas]
20 Hb_006623_020 0.1842303382 - - PREDICTED: protein LURP-one-related 7 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001019_200 Hb_001019_200 Hb_001352_090 Hb_001352_090 Hb_001019_200--Hb_001352_090 Hb_011609_050 Hb_011609_050 Hb_001019_200--Hb_011609_050 Hb_028900_010 Hb_028900_010 Hb_001019_200--Hb_028900_010 Hb_003142_070 Hb_003142_070 Hb_001019_200--Hb_003142_070 Hb_002374_280 Hb_002374_280 Hb_001019_200--Hb_002374_280 Hb_004976_020 Hb_004976_020 Hb_001019_200--Hb_004976_020 Hb_002687_140 Hb_002687_140 Hb_001352_090--Hb_002687_140 Hb_001348_070 Hb_001348_070 Hb_001352_090--Hb_001348_070 Hb_001352_090--Hb_003142_070 Hb_006623_020 Hb_006623_020 Hb_001352_090--Hb_006623_020 Hb_000808_250 Hb_000808_250 Hb_001352_090--Hb_000808_250 Hb_000014_170 Hb_000014_170 Hb_001352_090--Hb_000014_170 Hb_002351_020 Hb_002351_020 Hb_011609_050--Hb_002351_020 Hb_003849_250 Hb_003849_250 Hb_011609_050--Hb_003849_250 Hb_011609_050--Hb_003142_070 Hb_000334_270 Hb_000334_270 Hb_011609_050--Hb_000334_270 Hb_022256_060 Hb_022256_060 Hb_011609_050--Hb_022256_060 Hb_021422_010 Hb_021422_010 Hb_011609_050--Hb_021422_010 Hb_028900_010--Hb_003849_250 Hb_000487_110 Hb_000487_110 Hb_028900_010--Hb_000487_110 Hb_000116_180 Hb_000116_180 Hb_028900_010--Hb_000116_180 Hb_028900_010--Hb_002374_280 Hb_002527_030 Hb_002527_030 Hb_028900_010--Hb_002527_030 Hb_008406_110 Hb_008406_110 Hb_028900_010--Hb_008406_110 Hb_000359_330 Hb_000359_330 Hb_003142_070--Hb_000359_330 Hb_003142_070--Hb_006623_020 Hb_003091_010 Hb_003091_010 Hb_003142_070--Hb_003091_010 Hb_003142_070--Hb_000808_250 Hb_000920_280 Hb_000920_280 Hb_003142_070--Hb_000920_280 Hb_000487_420 Hb_000487_420 Hb_002374_280--Hb_000487_420 Hb_000181_120 Hb_000181_120 Hb_002374_280--Hb_000181_120 Hb_002374_280--Hb_004976_020 Hb_000649_070 Hb_000649_070 Hb_002374_280--Hb_000649_070 Hb_012753_170 Hb_012753_170 Hb_002374_280--Hb_012753_170 Hb_004976_020--Hb_021422_010 Hb_003849_060 Hb_003849_060 Hb_004976_020--Hb_003849_060 Hb_004976_020--Hb_000808_250 Hb_004976_020--Hb_000359_330 Hb_004976_020--Hb_000334_270 Hb_004976_020--Hb_006623_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.782481 0.534939 0.741468 0.0704917 1.4256 0.345866
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.352891 0.619364 0.282112 0.119164 0.493837

CAGE analysis