Hb_000627_020

Information

Type -
Description -
Location Contig627: 9104-17146
Sequence    

Annotation

kegg
ID sbi:SORBI_01g032130
description SORBIDRAFT_01g032130, Sb01g032130; hypothetical protein
nr
ID EYU18276.1
description hypothetical protein MIMGU_mgv1a021461mg, partial [Erythranthe guttata]
swissprot
ID -
description -
trembl
ID A0A022PR83
description Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a021461mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000627_020 0.0 - - hypothetical protein MIMGU_mgv1a021461mg, partial [Erythranthe guttata]
2 Hb_056095_010 0.1982089207 - - conserved hypothetical protein [Ricinus communis]
3 Hb_158203_010 0.2290352293 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
4 Hb_002149_030 0.2385383078 - - PREDICTED: uncharacterized protein LOC105647984 [Jatropha curcas]
5 Hb_004643_010 0.2417377279 - - cytochrome B, putative [Ricinus communis]
6 Hb_008305_010 0.24181314 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_004432_030 0.2436510332 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
8 Hb_017415_010 0.2476791081 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
9 Hb_028910_010 0.2558956412 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_000248_040 0.2563947495 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
11 Hb_171685_060 0.2569096093 - - PREDICTED: cytochrome c oxidase subunit 2 [Pyrus x bretschneideri]
12 Hb_004242_130 0.259728335 - - (-)-germacrene D synthase [Populus trichocarpa x Populus deltoides]
13 Hb_020154_010 0.2601849599 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_002395_040 0.2607141332 - - unknown [Populus trichocarpa]
15 Hb_025628_010 0.2616324103 - - PREDICTED: uncharacterized protein LOC104233990 [Nicotiana sylvestris]
16 Hb_000540_180 0.2616747171 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
17 Hb_061940_010 0.2621490909 - - PREDICTED: uncharacterized protein LOC104221396 [Nicotiana sylvestris]
18 Hb_006663_080 0.2658139513 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
19 Hb_121041_010 0.2658567341 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
20 Hb_000329_460 0.2661531293 - - PREDICTED: protein transport protein Sec61 subunit beta [Cucumis sativus]

Gene co-expression network

sample Hb_000627_020 Hb_000627_020 Hb_056095_010 Hb_056095_010 Hb_000627_020--Hb_056095_010 Hb_158203_010 Hb_158203_010 Hb_000627_020--Hb_158203_010 Hb_002149_030 Hb_002149_030 Hb_000627_020--Hb_002149_030 Hb_004643_010 Hb_004643_010 Hb_000627_020--Hb_004643_010 Hb_008305_010 Hb_008305_010 Hb_000627_020--Hb_008305_010 Hb_004432_030 Hb_004432_030 Hb_000627_020--Hb_004432_030 Hb_061940_010 Hb_061940_010 Hb_056095_010--Hb_061940_010 Hb_056095_010--Hb_158203_010 Hb_152483_010 Hb_152483_010 Hb_056095_010--Hb_152483_010 Hb_000710_100 Hb_000710_100 Hb_056095_010--Hb_000710_100 Hb_041711_040 Hb_041711_040 Hb_056095_010--Hb_041711_040 Hb_010623_010 Hb_010623_010 Hb_056095_010--Hb_010623_010 Hb_121041_010 Hb_121041_010 Hb_158203_010--Hb_121041_010 Hb_180367_010 Hb_180367_010 Hb_158203_010--Hb_180367_010 Hb_003567_020 Hb_003567_020 Hb_158203_010--Hb_003567_020 Hb_004445_030 Hb_004445_030 Hb_158203_010--Hb_004445_030 Hb_054127_020 Hb_054127_020 Hb_158203_010--Hb_054127_020 Hb_000248_040 Hb_000248_040 Hb_002149_030--Hb_000248_040 Hb_000329_460 Hb_000329_460 Hb_002149_030--Hb_000329_460 Hb_017415_010 Hb_017415_010 Hb_002149_030--Hb_017415_010 Hb_003797_030 Hb_003797_030 Hb_002149_030--Hb_003797_030 Hb_025662_020 Hb_025662_020 Hb_002149_030--Hb_025662_020 Hb_000646_030 Hb_000646_030 Hb_002149_030--Hb_000646_030 Hb_171685_060 Hb_171685_060 Hb_004643_010--Hb_171685_060 Hb_034168_070 Hb_034168_070 Hb_004643_010--Hb_034168_070 Hb_156746_010 Hb_156746_010 Hb_004643_010--Hb_156746_010 Hb_012163_050 Hb_012163_050 Hb_004643_010--Hb_012163_050 Hb_001508_010 Hb_001508_010 Hb_004643_010--Hb_001508_010 Hb_006040_030 Hb_006040_030 Hb_004643_010--Hb_006040_030 Hb_000011_470 Hb_000011_470 Hb_008305_010--Hb_000011_470 Hb_013420_040 Hb_013420_040 Hb_008305_010--Hb_013420_040 Hb_008305_010--Hb_121041_010 Hb_008305_010--Hb_158203_010 Hb_183191_020 Hb_183191_020 Hb_008305_010--Hb_183191_020 Hb_028910_010 Hb_028910_010 Hb_004432_030--Hb_028910_010 Hb_008375_020 Hb_008375_020 Hb_004432_030--Hb_008375_020 Hb_003607_100 Hb_003607_100 Hb_004432_030--Hb_003607_100 Hb_004242_130 Hb_004242_130 Hb_004432_030--Hb_004242_130 Hb_115572_040 Hb_115572_040 Hb_004432_030--Hb_115572_040 Hb_000002_470 Hb_000002_470 Hb_004432_030--Hb_000002_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.01802 0.0119896 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0165139 0 0 0 0.221278

CAGE analysis