Hb_004432_030

Information

Type -
Description -
Location Contig4432: 64055-75276
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa021229mg
description hypothetical protein
nr
ID XP_007213082.1
description hypothetical protein PRUPE_ppa021229mg [Prunus persica]
swissprot
ID Q99315
description Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3
trembl
ID M5WLY8
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004432_030 0.0 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
2 Hb_028910_010 0.0554976714 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_008375_020 0.1079452124 - - PREDICTED: uncharacterized protein LOC104894372 [Beta vulgaris subsp. vulgaris]
4 Hb_003607_100 0.1725046419 - - PREDICTED: zinc finger protein 3 [Jatropha curcas]
5 Hb_004242_130 0.1883365316 - - (-)-germacrene D synthase [Populus trichocarpa x Populus deltoides]
6 Hb_115572_040 0.2148379551 - - PREDICTED: uncharacterized protein LOC105632710 [Jatropha curcas]
7 Hb_000002_470 0.2151347066 - - hypothetical protein JCGZ_11185 [Jatropha curcas]
8 Hb_000003_630 0.2151347066 - - ATP-binding cassette transporter, putative [Ricinus communis]
9 Hb_000004_050 0.2151347066 - - PREDICTED: uncharacterized protein LOC105766968 [Gossypium raimondii]
10 Hb_000007_350 0.2151347066 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_000010_490 0.2151347066 - - hypothetical protein CICLE_v10027565mg, partial [Citrus clementina]
12 Hb_000017_170 0.2151347066 transcription factor TF Family: FAR1 hypothetical protein MIMGU_mgv1a025104mg, partial [Erythranthe guttata]
13 Hb_000017_240 0.2151347066 - - -
14 Hb_000022_030 0.2151347066 - - Uncharacterized protein TCM_003129 [Theobroma cacao]
15 Hb_000022_040 0.2151347066 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_000023_070 0.2151347066 - - hypothetical protein, partial [Cecembia lonarensis]
17 Hb_000024_060 0.2151347066 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
18 Hb_000027_250 0.2151347066 transcription factor TF Family: FAR1 hypothetical protein MIMGU_mgv1a025104mg, partial [Erythranthe guttata]
19 Hb_000031_360 0.2151347066 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_000037_130 0.2151347066 - - PREDICTED: uncharacterized protein LOC105775263 [Gossypium raimondii]

Gene co-expression network

sample Hb_004432_030 Hb_004432_030 Hb_028910_010 Hb_028910_010 Hb_004432_030--Hb_028910_010 Hb_008375_020 Hb_008375_020 Hb_004432_030--Hb_008375_020 Hb_003607_100 Hb_003607_100 Hb_004432_030--Hb_003607_100 Hb_004242_130 Hb_004242_130 Hb_004432_030--Hb_004242_130 Hb_115572_040 Hb_115572_040 Hb_004432_030--Hb_115572_040 Hb_000002_470 Hb_000002_470 Hb_004432_030--Hb_000002_470 Hb_028910_010--Hb_008375_020 Hb_028910_010--Hb_003607_100 Hb_028910_010--Hb_115572_040 Hb_003376_240 Hb_003376_240 Hb_028910_010--Hb_003376_240 Hb_002536_020 Hb_002536_020 Hb_028910_010--Hb_002536_020 Hb_008375_020--Hb_003607_100 Hb_076836_010 Hb_076836_010 Hb_008375_020--Hb_076836_010 Hb_001844_010 Hb_001844_010 Hb_008375_020--Hb_001844_010 Hb_002478_050 Hb_002478_050 Hb_008375_020--Hb_002478_050 Hb_003607_100--Hb_076836_010 Hb_003607_100--Hb_001844_010 Hb_003607_100--Hb_002478_050 Hb_000485_060 Hb_000485_060 Hb_003607_100--Hb_000485_060 Hb_072695_010 Hb_072695_010 Hb_004242_130--Hb_072695_010 Hb_001790_110 Hb_001790_110 Hb_004242_130--Hb_001790_110 Hb_000326_100 Hb_000326_100 Hb_004242_130--Hb_000326_100 Hb_004242_130--Hb_000002_470 Hb_000003_630 Hb_000003_630 Hb_004242_130--Hb_000003_630 Hb_000004_050 Hb_000004_050 Hb_004242_130--Hb_000004_050 Hb_115572_040--Hb_002536_020 Hb_115572_040--Hb_003376_240 Hb_000504_210 Hb_000504_210 Hb_115572_040--Hb_000504_210 Hb_007749_030 Hb_007749_030 Hb_115572_040--Hb_007749_030 Hb_115572_040--Hb_008375_020 Hb_000002_470--Hb_000003_630 Hb_000002_470--Hb_000004_050 Hb_000007_350 Hb_000007_350 Hb_000002_470--Hb_000007_350 Hb_000010_490 Hb_000010_490 Hb_000002_470--Hb_000010_490 Hb_000017_170 Hb_000017_170 Hb_000002_470--Hb_000017_170 Hb_000017_240 Hb_000017_240 Hb_000002_470--Hb_000017_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.00677368 0 0 0 0.068878

CAGE analysis