Hb_007749_030

Information

Type -
Description -
Location Contig7749: 61999-70103
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007749_030 0.0 - - -
2 Hb_002536_020 0.0227802578 - - PREDICTED: uncharacterized protein LOC105801112 [Gossypium raimondii]
3 Hb_003155_060 0.1108253258 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
4 Hb_000576_100 0.1111673887 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
5 Hb_108768_010 0.1155137855 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
6 Hb_003487_010 0.1909778646 - - -
7 Hb_003607_100 0.2008428938 - - PREDICTED: zinc finger protein 3 [Jatropha curcas]
8 Hb_115572_040 0.2082441931 - - PREDICTED: uncharacterized protein LOC105632710 [Jatropha curcas]
9 Hb_100684_010 0.2114852858 - - hypothetical protein, partial [Pseudomonas fluorescens]
10 Hb_008375_020 0.2164537373 - - PREDICTED: uncharacterized protein LOC104894372 [Beta vulgaris subsp. vulgaris]
11 Hb_076836_010 0.2253212614 - - PREDICTED: uncharacterized protein LOC104801925 [Tarenaya hassleriana]
12 Hb_001844_010 0.2255004157 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
13 Hb_002478_050 0.2261989423 - - K(+)/H(+) antiporter, putative [Ricinus communis]
14 Hb_000485_060 0.2266146347 - - PREDICTED: uncharacterized protein LOC105641351 [Jatropha curcas]
15 Hb_005781_010 0.2273866636 - - PREDICTED: probable terpene synthase 6 [Jatropha curcas]
16 Hb_006094_010 0.2277505141 - - PREDICTED: uncharacterized protein LOC104227769, partial [Nicotiana sylvestris]
17 Hb_177166_010 0.2284663637 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
18 Hb_003828_010 0.2288951156 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
19 Hb_064445_030 0.2289884161 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
20 Hb_024446_010 0.2293931973 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_007749_030 Hb_007749_030 Hb_002536_020 Hb_002536_020 Hb_007749_030--Hb_002536_020 Hb_003155_060 Hb_003155_060 Hb_007749_030--Hb_003155_060 Hb_000576_100 Hb_000576_100 Hb_007749_030--Hb_000576_100 Hb_108768_010 Hb_108768_010 Hb_007749_030--Hb_108768_010 Hb_003487_010 Hb_003487_010 Hb_007749_030--Hb_003487_010 Hb_003607_100 Hb_003607_100 Hb_007749_030--Hb_003607_100 Hb_002536_020--Hb_003155_060 Hb_002536_020--Hb_000576_100 Hb_002536_020--Hb_108768_010 Hb_002536_020--Hb_003607_100 Hb_115572_040 Hb_115572_040 Hb_002536_020--Hb_115572_040 Hb_003155_060--Hb_000576_100 Hb_003155_060--Hb_108768_010 Hb_003155_060--Hb_003487_010 Hb_017687_010 Hb_017687_010 Hb_003155_060--Hb_017687_010 Hb_000576_100--Hb_108768_010 Hb_000576_100--Hb_003487_010 Hb_000576_100--Hb_017687_010 Hb_108768_010--Hb_017687_010 Hb_108768_010--Hb_003487_010 Hb_155403_010 Hb_155403_010 Hb_003487_010--Hb_155403_010 Hb_003487_010--Hb_002536_020 Hb_008375_020 Hb_008375_020 Hb_003607_100--Hb_008375_020 Hb_028910_010 Hb_028910_010 Hb_003607_100--Hb_028910_010 Hb_076836_010 Hb_076836_010 Hb_003607_100--Hb_076836_010 Hb_001844_010 Hb_001844_010 Hb_003607_100--Hb_001844_010 Hb_002478_050 Hb_002478_050 Hb_003607_100--Hb_002478_050 Hb_000485_060 Hb_000485_060 Hb_003607_100--Hb_000485_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.14779 0 0 0.0485457 0.428223

CAGE analysis