Hb_000618_090

Information

Type -
Description -
Location Contig618: 140967-141810
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000618_090 0.0 - - -
2 Hb_000816_260 0.2036678829 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
3 Hb_000094_040 0.2342242307 - - -
4 Hb_003994_130 0.2381659002 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Jatropha curcas]
5 Hb_063943_010 0.2389453601 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
6 Hb_000964_070 0.2475758674 - - PREDICTED: ATP synthase subunit O, mitochondrial [Jatropha curcas]
7 Hb_000080_160 0.255834581 - - Peroxin 13 [Theobroma cacao]
8 Hb_001172_140 0.2626318164 - - hypothetical protein POPTR_0014s17790g [Populus trichocarpa]
9 Hb_000139_070 0.2638050466 - - PREDICTED: probable linoleate 9S-lipoxygenase 5 [Jatropha curcas]
10 Hb_010521_030 0.2661295788 - - -
11 Hb_167103_010 0.2722448931 - - PREDICTED: transcriptional activator DEMETER isoform X1 [Jatropha curcas]
12 Hb_085083_020 0.2777319487 - - PREDICTED: receptor-like protein kinase THESEUS 1 [Jatropha curcas]
13 Hb_003059_010 0.279607113 - - PREDICTED: uncharacterized protein LOC104236538 [Nicotiana sylvestris]
14 Hb_000078_090 0.2809082716 - - PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [Jatropha curcas]
15 Hb_104812_010 0.2847334105 - - PREDICTED: mediator of RNA polymerase II transcription subunit 9 [Populus euphratica]
16 Hb_009455_020 0.2866777101 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
17 Hb_089206_010 0.2873113674 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
18 Hb_005285_020 0.2880767865 - - -
19 Hb_003607_070 0.2893036609 - - PREDICTED: pentatricopeptide repeat-containing protein At5g48910 [Jatropha curcas]
20 Hb_005505_040 0.2900317013 - - -

Gene co-expression network

sample Hb_000618_090 Hb_000618_090 Hb_000816_260 Hb_000816_260 Hb_000618_090--Hb_000816_260 Hb_000094_040 Hb_000094_040 Hb_000618_090--Hb_000094_040 Hb_003994_130 Hb_003994_130 Hb_000618_090--Hb_003994_130 Hb_063943_010 Hb_063943_010 Hb_000618_090--Hb_063943_010 Hb_000964_070 Hb_000964_070 Hb_000618_090--Hb_000964_070 Hb_000080_160 Hb_000080_160 Hb_000618_090--Hb_000080_160 Hb_003124_030 Hb_003124_030 Hb_000816_260--Hb_003124_030 Hb_000816_260--Hb_063943_010 Hb_167103_010 Hb_167103_010 Hb_000816_260--Hb_167103_010 Hb_000103_570 Hb_000103_570 Hb_000816_260--Hb_000103_570 Hb_006905_030 Hb_006905_030 Hb_000816_260--Hb_006905_030 Hb_000455_130 Hb_000455_130 Hb_000816_260--Hb_000455_130 Hb_000078_090 Hb_000078_090 Hb_000094_040--Hb_000078_090 Hb_113673_010 Hb_113673_010 Hb_000094_040--Hb_113673_010 Hb_000094_040--Hb_063943_010 Hb_010521_030 Hb_010521_030 Hb_000094_040--Hb_010521_030 Hb_001393_010 Hb_001393_010 Hb_000094_040--Hb_001393_010 Hb_000088_190 Hb_000088_190 Hb_003994_130--Hb_000088_190 Hb_001511_050 Hb_001511_050 Hb_003994_130--Hb_001511_050 Hb_004100_050 Hb_004100_050 Hb_003994_130--Hb_004100_050 Hb_000739_240 Hb_000739_240 Hb_003994_130--Hb_000739_240 Hb_171900_040 Hb_171900_040 Hb_003994_130--Hb_171900_040 Hb_003994_130--Hb_006905_030 Hb_146339_010 Hb_146339_010 Hb_063943_010--Hb_146339_010 Hb_003059_010 Hb_003059_010 Hb_063943_010--Hb_003059_010 Hb_089206_010 Hb_089206_010 Hb_063943_010--Hb_089206_010 Hb_003175_110 Hb_003175_110 Hb_063943_010--Hb_003175_110 Hb_183443_010 Hb_183443_010 Hb_063943_010--Hb_183443_010 Hb_063943_010--Hb_003124_030 Hb_004984_080 Hb_004984_080 Hb_000964_070--Hb_004984_080 Hb_085083_020 Hb_085083_020 Hb_000964_070--Hb_085083_020 Hb_000941_150 Hb_000941_150 Hb_000964_070--Hb_000941_150 Hb_003211_030 Hb_003211_030 Hb_000964_070--Hb_003211_030 Hb_000676_200 Hb_000676_200 Hb_000964_070--Hb_000676_200 Hb_066487_010 Hb_066487_010 Hb_000964_070--Hb_066487_010 Hb_002722_010 Hb_002722_010 Hb_000080_160--Hb_002722_010 Hb_006472_080 Hb_006472_080 Hb_000080_160--Hb_006472_080 Hb_021650_020 Hb_021650_020 Hb_000080_160--Hb_021650_020 Hb_000080_160--Hb_003994_130 Hb_001021_070 Hb_001021_070 Hb_000080_160--Hb_001021_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.297362 0.214939 0.412025 0.164071 0.441893 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.094859 0 0.655947 0.488027 0.580943

CAGE analysis