Hb_000445_270

Information

Type -
Description -
Location Contig445: 288111-291849
Sequence    

Annotation

kegg
ID rcu:RCOM_0560530
description ATP binding protein, putative (EC:2.7.11.30 2.7.11.25)
nr
ID XP_002520279.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9LMP1
description Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1
trembl
ID B9S2R0
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0560530 PE=4 SV=1
Gene Ontology
ID GO:0005622
description wall-associated receptor kinase-like 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000445_270 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_001006_150 0.0535697898 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
3 Hb_080922_010 0.0551179065 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
4 Hb_005649_060 0.0592832277 - - PREDICTED: uncharacterized protein LOC105644161 [Jatropha curcas]
5 Hb_000359_050 0.0630161363 - - Oxygen-evolving enhancer protein 2, chloroplast precursor, putative [Ricinus communis]
6 Hb_005329_010 0.0650260866 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Jatropha curcas]
7 Hb_001864_050 0.0713883943 - - chloroplast oxygen-evolving enhancer protein [Manihot esculenta]
8 Hb_000088_230 0.0716035708 - - hypothetical protein POPTR_0013s11340g [Populus trichocarpa]
9 Hb_005211_080 0.0717683279 - - hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
10 Hb_001338_120 0.0735499409 - - hypothetical chloroplast RF68 (chloroplast) [Ipomoea batatas]
11 Hb_002871_180 0.0742992694 - - photosystem II 10 kDa polypeptide, chloroplastic [Jatropha curcas]
12 Hb_000809_190 0.0768843692 - - PREDICTED: myosin-6-like [Jatropha curcas]
13 Hb_001766_160 0.0773517229 - - Serine/threonine-protein kinase SAPK1 [Gossypium arboreum]
14 Hb_000340_280 0.0813351721 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000115_020 0.0817868786 transcription factor TF Family: C2C2-CO-like zinc finger family protein [Populus trichocarpa]
16 Hb_003651_030 0.0850094123 - - lyase, putative [Ricinus communis]
17 Hb_007477_060 0.0855699871 - - unknown [Medicago truncatula]
18 Hb_001322_120 0.086783749 - - nutrient reservoir, putative [Ricinus communis]
19 Hb_004712_220 0.0873414175 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004109_140 0.0896217763 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000445_270 Hb_000445_270 Hb_001006_150 Hb_001006_150 Hb_000445_270--Hb_001006_150 Hb_080922_010 Hb_080922_010 Hb_000445_270--Hb_080922_010 Hb_005649_060 Hb_005649_060 Hb_000445_270--Hb_005649_060 Hb_000359_050 Hb_000359_050 Hb_000445_270--Hb_000359_050 Hb_005329_010 Hb_005329_010 Hb_000445_270--Hb_005329_010 Hb_001864_050 Hb_001864_050 Hb_000445_270--Hb_001864_050 Hb_001006_150--Hb_000359_050 Hb_005211_080 Hb_005211_080 Hb_001006_150--Hb_005211_080 Hb_001766_160 Hb_001766_160 Hb_001006_150--Hb_001766_160 Hb_000340_280 Hb_000340_280 Hb_001006_150--Hb_000340_280 Hb_001338_120 Hb_001338_120 Hb_001006_150--Hb_001338_120 Hb_003536_020 Hb_003536_020 Hb_080922_010--Hb_003536_020 Hb_007477_060 Hb_007477_060 Hb_080922_010--Hb_007477_060 Hb_002871_180 Hb_002871_180 Hb_080922_010--Hb_002871_180 Hb_000705_010 Hb_000705_010 Hb_080922_010--Hb_000705_010 Hb_080922_010--Hb_005329_010 Hb_005649_060--Hb_002871_180 Hb_005649_060--Hb_001766_160 Hb_000115_020 Hb_000115_020 Hb_005649_060--Hb_000115_020 Hb_004712_220 Hb_004712_220 Hb_005649_060--Hb_004712_220 Hb_005649_060--Hb_001006_150 Hb_000962_090 Hb_000962_090 Hb_000359_050--Hb_000962_090 Hb_000359_050--Hb_000340_280 Hb_000359_050--Hb_005211_080 Hb_001014_240 Hb_001014_240 Hb_000359_050--Hb_001014_240 Hb_003651_030 Hb_003651_030 Hb_000359_050--Hb_003651_030 Hb_005329_010--Hb_005211_080 Hb_005329_010--Hb_001766_160 Hb_000088_230 Hb_000088_230 Hb_005329_010--Hb_000088_230 Hb_005329_010--Hb_001006_150 Hb_001322_120 Hb_001322_120 Hb_005329_010--Hb_001322_120 Hb_000460_040 Hb_000460_040 Hb_005329_010--Hb_000460_040 Hb_002805_200 Hb_002805_200 Hb_001864_050--Hb_002805_200 Hb_001864_050--Hb_001338_120 Hb_001864_050--Hb_001006_150 Hb_000482_160 Hb_000482_160 Hb_001864_050--Hb_000482_160 Hb_000281_120 Hb_000281_120 Hb_001864_050--Hb_000281_120 Hb_005305_140 Hb_005305_140 Hb_001864_050--Hb_005305_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.272534 2.1581 0.425818 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0451135 2.4038

CAGE analysis