Hb_000402_150

Information

Type -
Description -
Location Contig402: 152081-156975
Sequence    

Annotation

kegg
ID rcu:RCOM_0024530
description anthranilate phosphoribosyltransferase, putative
nr
ID XP_012085466.1
description PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]
swissprot
ID O66576
description Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus (strain VF5) GN=trpD PE=3 SV=1
trembl
ID A0A067K4D1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17802 PE=4 SV=1
Gene Ontology
ID GO:0016757
description anthranilate phosphoribosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39930: 152181-156968
cDNA
(Sanger)
(ID:Location)		 017_B23.ab1: 152181-152800

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000402_150 0.0 - - PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]
2 Hb_008114_040 0.0525333648 - - Fanconi anemia group D2 [Gossypium arboreum]
3 Hb_000684_510 0.0664789666 - - run and tbc1 domain containing 3, plant, putative [Ricinus communis]
4 Hb_001878_050 0.0760283075 - - PREDICTED: uncharacterized protein LOC105646110 isoform X3 [Jatropha curcas]
5 Hb_001357_310 0.0790695507 - - PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Jatropha curcas]
6 Hb_012092_050 0.0791621821 - - PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform X1 [Jatropha curcas]
7 Hb_006588_060 0.0802750663 - - PREDICTED: DDB1- and CUL4-associated factor 13 [Jatropha curcas]
8 Hb_000513_090 0.0807143604 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
9 Hb_004333_040 0.0822075449 - - PREDICTED: uncharacterized protein LOC105629988 [Jatropha curcas]
10 Hb_007257_060 0.0826179451 - - PREDICTED: omega-amidase,chloroplastic [Jatropha curcas]
11 Hb_010775_030 0.082970828 - - PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
12 Hb_000617_230 0.0840297129 - - PREDICTED: tafazzin isoform X1 [Jatropha curcas]
13 Hb_000107_660 0.0854711279 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
14 Hb_001660_100 0.0868811546 - - PREDICTED: glyoxylate reductase/hydroxypyruvate reductase [Jatropha curcas]
15 Hb_002014_010 0.0873599501 - - Uncharacterized protein isoform 1 [Theobroma cacao]
16 Hb_164390_010 0.0876921157 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
17 Hb_003544_060 0.0894386661 - - hypothetical protein JCGZ_22100 [Jatropha curcas]
18 Hb_003711_010 0.089571836 - - isopropylmalate synthase, putative [Ricinus communis]
19 Hb_007894_150 0.0896732471 - - hypothetical protein EUGRSUZ_F03462 [Eucalyptus grandis]
20 Hb_000189_600 0.0902013242 - - PREDICTED: protein MON2 homolog isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000402_150 Hb_000402_150 Hb_008114_040 Hb_008114_040 Hb_000402_150--Hb_008114_040 Hb_000684_510 Hb_000684_510 Hb_000402_150--Hb_000684_510 Hb_001878_050 Hb_001878_050 Hb_000402_150--Hb_001878_050 Hb_001357_310 Hb_001357_310 Hb_000402_150--Hb_001357_310 Hb_012092_050 Hb_012092_050 Hb_000402_150--Hb_012092_050 Hb_006588_060 Hb_006588_060 Hb_000402_150--Hb_006588_060 Hb_000189_600 Hb_000189_600 Hb_008114_040--Hb_000189_600 Hb_004333_040 Hb_004333_040 Hb_008114_040--Hb_004333_040 Hb_008114_040--Hb_006588_060 Hb_002400_340 Hb_002400_340 Hb_008114_040--Hb_002400_340 Hb_000617_230 Hb_000617_230 Hb_008114_040--Hb_000617_230 Hb_003711_010 Hb_003711_010 Hb_000684_510--Hb_003711_010 Hb_001723_010 Hb_001723_010 Hb_000684_510--Hb_001723_010 Hb_004517_020 Hb_004517_020 Hb_000684_510--Hb_004517_020 Hb_000373_170 Hb_000373_170 Hb_000684_510--Hb_000373_170 Hb_000085_170 Hb_000085_170 Hb_000684_510--Hb_000085_170 Hb_001878_050--Hb_000617_230 Hb_000565_040 Hb_000565_040 Hb_001878_050--Hb_000565_040 Hb_003544_060 Hb_003544_060 Hb_001878_050--Hb_003544_060 Hb_001878_050--Hb_008114_040 Hb_002344_060 Hb_002344_060 Hb_001878_050--Hb_002344_060 Hb_010775_030 Hb_010775_030 Hb_001357_310--Hb_010775_030 Hb_007257_060 Hb_007257_060 Hb_001357_310--Hb_007257_060 Hb_002014_010 Hb_002014_010 Hb_001357_310--Hb_002014_010 Hb_001357_310--Hb_012092_050 Hb_001357_310--Hb_006588_060 Hb_012092_050--Hb_007257_060 Hb_012092_050--Hb_002014_010 Hb_001300_280 Hb_001300_280 Hb_012092_050--Hb_001300_280 Hb_001635_110 Hb_001635_110 Hb_012092_050--Hb_001635_110 Hb_012092_050--Hb_006588_060 Hb_004109_320 Hb_004109_320 Hb_012092_050--Hb_004109_320 Hb_006588_060--Hb_001300_280 Hb_006588_060--Hb_010775_030 Hb_000008_420 Hb_000008_420 Hb_006588_060--Hb_000008_420 Hb_050847_050 Hb_050847_050 Hb_006588_060--Hb_050847_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.11813 11.6697 14.2787 10.4532 5.45581 7.80256
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.37948 7.49112 6.49887 14.6335 6.33586

CAGE analysis