Hb_000210_140

Information

Type -
Description -
Location Contig210: 210152-210868
Sequence    

Annotation

kegg
ID pop:POPTR_0016s07240g
description POPTRDRAFT_576520; hypothetical protein
nr
ID XP_012074339.1
description PREDICTED: uncharacterized protein LOC105635827 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KWB1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08773 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21744: 210023-210430
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000210_140 0.0 - - PREDICTED: uncharacterized protein LOC105635827 [Jatropha curcas]
2 Hb_006153_130 0.0805298026 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
3 Hb_001856_160 0.1145513973 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003847_050 0.125160253 - - PREDICTED: aquaporin SIP1-1 [Jatropha curcas]
5 Hb_003788_010 0.1278844248 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
6 Hb_007943_020 0.129424338 - - transcription factor, putative [Ricinus communis]
7 Hb_029260_010 0.1318000583 - - nitrate transporter, putative [Ricinus communis]
8 Hb_000963_010 0.1328959267 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]
9 Hb_012787_050 0.1350616688 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
10 Hb_000362_050 0.1365237191 transcription factor TF Family: NOZZLE PREDICTED: uncharacterized protein LOC105635737 [Jatropha curcas]
11 Hb_023956_010 0.1398140154 - - glutathione s-transferase, putative [Ricinus communis]
12 Hb_130967_010 0.1409317357 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_006846_030 0.1424059938 - - respiratory burst oxidase A [Manihot esculenta]
14 Hb_000483_130 0.1435303269 - - PREDICTED: uncharacterized protein LOC105644062 isoform X1 [Jatropha curcas]
15 Hb_002042_160 0.145315669 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
16 Hb_007632_130 0.1453872694 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
17 Hb_000847_050 0.1479594385 - - PREDICTED: dCTP pyrophosphatase 1-like [Jatropha curcas]
18 Hb_002236_010 0.1484184478 - - PREDICTED: bidirectional sugar transporter SWEET4 [Jatropha curcas]
19 Hb_000020_030 0.1494005457 - - protein binding protein, putative [Ricinus communis]
20 Hb_009615_100 0.1504344048 - - hypothetical protein JCGZ_24459 [Jatropha curcas]

Gene co-expression network

sample Hb_000210_140 Hb_000210_140 Hb_006153_130 Hb_006153_130 Hb_000210_140--Hb_006153_130 Hb_001856_160 Hb_001856_160 Hb_000210_140--Hb_001856_160 Hb_003847_050 Hb_003847_050 Hb_000210_140--Hb_003847_050 Hb_003788_010 Hb_003788_010 Hb_000210_140--Hb_003788_010 Hb_007943_020 Hb_007943_020 Hb_000210_140--Hb_007943_020 Hb_029260_010 Hb_029260_010 Hb_000210_140--Hb_029260_010 Hb_006153_130--Hb_001856_160 Hb_002236_010 Hb_002236_010 Hb_006153_130--Hb_002236_010 Hb_007625_030 Hb_007625_030 Hb_006153_130--Hb_007625_030 Hb_000847_050 Hb_000847_050 Hb_006153_130--Hb_000847_050 Hb_009615_100 Hb_009615_100 Hb_006153_130--Hb_009615_100 Hb_001799_090 Hb_001799_090 Hb_001856_160--Hb_001799_090 Hb_003376_300 Hb_003376_300 Hb_001856_160--Hb_003376_300 Hb_002289_110 Hb_002289_110 Hb_001856_160--Hb_002289_110 Hb_005489_120 Hb_005489_120 Hb_001856_160--Hb_005489_120 Hb_000454_200 Hb_000454_200 Hb_001856_160--Hb_000454_200 Hb_023956_010 Hb_023956_010 Hb_003847_050--Hb_023956_010 Hb_006846_030 Hb_006846_030 Hb_003847_050--Hb_006846_030 Hb_001568_010 Hb_001568_010 Hb_003847_050--Hb_001568_010 Hb_012787_050 Hb_012787_050 Hb_003847_050--Hb_012787_050 Hb_019026_050 Hb_019026_050 Hb_003847_050--Hb_019026_050 Hb_002448_020 Hb_002448_020 Hb_003847_050--Hb_002448_020 Hb_000934_290 Hb_000934_290 Hb_003788_010--Hb_000934_290 Hb_130967_010 Hb_130967_010 Hb_003788_010--Hb_130967_010 Hb_039496_010 Hb_039496_010 Hb_003788_010--Hb_039496_010 Hb_000335_050 Hb_000335_050 Hb_003788_010--Hb_000335_050 Hb_009581_050 Hb_009581_050 Hb_003788_010--Hb_009581_050 Hb_012807_060 Hb_012807_060 Hb_003788_010--Hb_012807_060 Hb_000347_420 Hb_000347_420 Hb_007943_020--Hb_000347_420 Hb_003226_030 Hb_003226_030 Hb_007943_020--Hb_003226_030 Hb_007943_020--Hb_029260_010 Hb_000020_030 Hb_000020_030 Hb_007943_020--Hb_000020_030 Hb_002042_160 Hb_002042_160 Hb_007943_020--Hb_002042_160 Hb_138606_020 Hb_138606_020 Hb_007943_020--Hb_138606_020 Hb_029260_010--Hb_138606_020 Hb_005357_020 Hb_005357_020 Hb_029260_010--Hb_005357_020 Hb_012743_020 Hb_012743_020 Hb_029260_010--Hb_012743_020 Hb_029260_010--Hb_000347_420 Hb_000840_050 Hb_000840_050 Hb_029260_010--Hb_000840_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.8469 0.869115 2.88309 0 0.207746
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.27597 0.976305

CAGE analysis