Hb_146868_010

Information

Type -
Description -
Location Contig146868: 512-930
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_146868_010 0.0 - - -
2 Hb_034552_030 0.1607025896 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
3 Hb_000676_190 0.1636828801 - - hypothetical protein JCGZ_08279 [Jatropha curcas]
4 Hb_001960_020 0.1641298727 - - PREDICTED: mitochondrial arginine transporter BAC2 [Jatropha curcas]
5 Hb_006502_070 0.1645314353 - - separase, putative [Ricinus communis]
6 Hb_000061_370 0.1655169218 - - PREDICTED: zinc finger RNA-binding protein [Vitis vinifera]
7 Hb_002028_220 0.1684859174 - - aminoadipic semialdehyde synthase, putative [Ricinus communis]
8 Hb_000252_170 0.1731114883 - - PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]
9 Hb_006816_200 0.1732892255 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003120_030 0.1760344417 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
11 Hb_003159_080 0.1769440534 - - PREDICTED: uncharacterized protein LOC105639276 [Jatropha curcas]
12 Hb_000003_160 0.1819682936 - - PREDICTED: mitochondrial import receptor subunit TOM40-1 [Jatropha curcas]
13 Hb_003813_050 0.1824453539 - - PREDICTED: tRNA-specific adenosine deaminase 2-like isoform X1 [Jatropha curcas]
14 Hb_000028_590 0.1847470503 - - PREDICTED: putative serine/threonine-protein kinase [Jatropha curcas]
15 Hb_004800_070 0.1847661766 - - -
16 Hb_001018_050 0.1857498214 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
17 Hb_004787_110 0.1859451401 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004070_020 0.1863747749 - - rhythmically-expressed protein 2 protein, putative [Ricinus communis]
19 Hb_171284_010 0.1867471457 - - -
20 Hb_001894_150 0.1887631251 - - nucleoredoxin, putative [Ricinus communis]

Gene co-expression network

sample Hb_146868_010 Hb_146868_010 Hb_034552_030 Hb_034552_030 Hb_146868_010--Hb_034552_030 Hb_000676_190 Hb_000676_190 Hb_146868_010--Hb_000676_190 Hb_001960_020 Hb_001960_020 Hb_146868_010--Hb_001960_020 Hb_006502_070 Hb_006502_070 Hb_146868_010--Hb_006502_070 Hb_000061_370 Hb_000061_370 Hb_146868_010--Hb_000061_370 Hb_002028_220 Hb_002028_220 Hb_146868_010--Hb_002028_220 Hb_002320_040 Hb_002320_040 Hb_034552_030--Hb_002320_040 Hb_006588_200 Hb_006588_200 Hb_034552_030--Hb_006588_200 Hb_000020_150 Hb_000020_150 Hb_034552_030--Hb_000020_150 Hb_003464_080 Hb_003464_080 Hb_034552_030--Hb_003464_080 Hb_028872_090 Hb_028872_090 Hb_034552_030--Hb_028872_090 Hb_000120_430 Hb_000120_430 Hb_034552_030--Hb_000120_430 Hb_001018_050 Hb_001018_050 Hb_000676_190--Hb_001018_050 Hb_000347_440 Hb_000347_440 Hb_000676_190--Hb_000347_440 Hb_000140_480 Hb_000140_480 Hb_000676_190--Hb_000140_480 Hb_000152_660 Hb_000152_660 Hb_000676_190--Hb_000152_660 Hb_006913_010 Hb_006913_010 Hb_000676_190--Hb_006913_010 Hb_003044_030 Hb_003044_030 Hb_000676_190--Hb_003044_030 Hb_006827_020 Hb_006827_020 Hb_001960_020--Hb_006827_020 Hb_040262_010 Hb_040262_010 Hb_001960_020--Hb_040262_010 Hb_007317_110 Hb_007317_110 Hb_001960_020--Hb_007317_110 Hb_002783_240 Hb_002783_240 Hb_001960_020--Hb_002783_240 Hb_000700_140 Hb_000700_140 Hb_001960_020--Hb_000700_140 Hb_007059_010 Hb_007059_010 Hb_001960_020--Hb_007059_010 Hb_166236_010 Hb_166236_010 Hb_006502_070--Hb_166236_010 Hb_006502_070--Hb_000061_370 Hb_004491_010 Hb_004491_010 Hb_006502_070--Hb_004491_010 Hb_000041_270 Hb_000041_270 Hb_006502_070--Hb_000041_270 Hb_009411_050 Hb_009411_050 Hb_006502_070--Hb_009411_050 Hb_010417_080 Hb_010417_080 Hb_006502_070--Hb_010417_080 Hb_015746_010 Hb_015746_010 Hb_000061_370--Hb_015746_010 Hb_001677_210 Hb_001677_210 Hb_000061_370--Hb_001677_210 Hb_002043_190 Hb_002043_190 Hb_000061_370--Hb_002043_190 Hb_001404_100 Hb_001404_100 Hb_000061_370--Hb_001404_100 Hb_000327_120 Hb_000327_120 Hb_000061_370--Hb_000327_120 Hb_004230_040 Hb_004230_040 Hb_002028_220--Hb_004230_040 Hb_002028_220--Hb_003044_030 Hb_001472_120 Hb_001472_120 Hb_002028_220--Hb_001472_120 Hb_000252_170 Hb_000252_170 Hb_002028_220--Hb_000252_170 Hb_002391_270 Hb_002391_270 Hb_002028_220--Hb_002391_270 Hb_006816_200 Hb_006816_200 Hb_002028_220--Hb_006816_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.711996 0.328773 0.550385 0.518198 0.925865 0.727825
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.765361 0.801936 0.614871 1.50582 0

CAGE analysis