Hb_143766_100

Information

Type -
Description -
Location Contig143766: 76733-78509
Sequence    

Annotation

kegg
ID rcu:RCOM_1048260
description hypothetical protein
nr
ID XP_012076813.1
description PREDICTED: uncharacterized protein LOC105637800 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07328 PE=4 SV=1
Gene Ontology
ID GO:0008168
description histone-lysine n-methyltransferase ehmt2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_143766_100 0.0 - - PREDICTED: uncharacterized protein LOC105637800 [Jatropha curcas]
2 Hb_001258_140 0.1409259079 - - -
3 Hb_178968_170 0.1566860976 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Jatropha curcas]
4 Hb_012395_210 0.1691018693 - - conserved hypothetical protein [Ricinus communis]
5 Hb_009838_040 0.1835456721 - - hypothetical protein JCGZ_12866 [Jatropha curcas]
6 Hb_000281_230 0.1980682719 - - PREDICTED: probable lysine--tRNA ligase, cytoplasmic isoform X2 [Jatropha curcas]
7 Hb_004223_260 0.1986130025 - - hypothetical protein F383_09277 [Gossypium arboreum]
8 Hb_004474_010 0.2032233466 - - unnamed protein product [Coffea canephora]
9 Hb_002450_070 0.2072279431 - - (S)-N-methylcoclaurine 3'-hydroxylase isozyme, putative [Ricinus communis]
10 Hb_081504_010 0.2073232637 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
11 Hb_000318_490 0.2107034569 - - PREDICTED: mitochondrial import receptor subunit TOM6 homolog [Jatropha curcas]
12 Hb_152021_010 0.2121134288 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
13 Hb_000106_100 0.2122392854 - - -
14 Hb_002014_160 0.2167914647 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor C-1 [Jatropha curcas]
15 Hb_000997_330 0.2179577966 - - hypothetical protein POPTR_0010s08940g [Populus trichocarpa]
16 Hb_000059_350 0.2190021995 - - glutamate dehydrogenase, putative [Ricinus communis]
17 Hb_001723_080 0.2194358686 - - hypothetical protein L484_026139 [Morus notabilis]
18 Hb_000215_180 0.2198271923 - - hypothetical protein 17 [Hevea brasiliensis]
19 Hb_004333_030 0.2247513137 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Jatropha curcas]
20 Hb_000261_450 0.22475509 - - Pectinesterase U1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_143766_100 Hb_143766_100 Hb_001258_140 Hb_001258_140 Hb_143766_100--Hb_001258_140 Hb_178968_170 Hb_178968_170 Hb_143766_100--Hb_178968_170 Hb_012395_210 Hb_012395_210 Hb_143766_100--Hb_012395_210 Hb_009838_040 Hb_009838_040 Hb_143766_100--Hb_009838_040 Hb_000281_230 Hb_000281_230 Hb_143766_100--Hb_000281_230 Hb_004223_260 Hb_004223_260 Hb_143766_100--Hb_004223_260 Hb_001258_140--Hb_009838_040 Hb_000788_080 Hb_000788_080 Hb_001258_140--Hb_000788_080 Hb_003095_070 Hb_003095_070 Hb_001258_140--Hb_003095_070 Hb_001258_140--Hb_012395_210 Hb_001276_060 Hb_001276_060 Hb_001258_140--Hb_001276_060 Hb_080477_060 Hb_080477_060 Hb_178968_170--Hb_080477_060 Hb_004474_010 Hb_004474_010 Hb_178968_170--Hb_004474_010 Hb_001723_080 Hb_001723_080 Hb_178968_170--Hb_001723_080 Hb_178968_170--Hb_012395_210 Hb_103752_010 Hb_103752_010 Hb_178968_170--Hb_103752_010 Hb_004297_040 Hb_004297_040 Hb_012395_210--Hb_004297_040 Hb_000078_010 Hb_000078_010 Hb_012395_210--Hb_000078_010 Hb_001213_120 Hb_001213_120 Hb_012395_210--Hb_001213_120 Hb_000367_280 Hb_000367_280 Hb_012395_210--Hb_000367_280 Hb_001102_250 Hb_001102_250 Hb_012395_210--Hb_001102_250 Hb_005539_210 Hb_005539_210 Hb_012395_210--Hb_005539_210 Hb_000215_180 Hb_000215_180 Hb_009838_040--Hb_000215_180 Hb_012239_100 Hb_012239_100 Hb_009838_040--Hb_012239_100 Hb_005000_160 Hb_005000_160 Hb_009838_040--Hb_005000_160 Hb_009838_040--Hb_000788_080 Hb_000106_100 Hb_000106_100 Hb_009838_040--Hb_000106_100 Hb_001159_200 Hb_001159_200 Hb_000281_230--Hb_001159_200 Hb_004635_060 Hb_004635_060 Hb_000281_230--Hb_004635_060 Hb_001369_400 Hb_001369_400 Hb_000281_230--Hb_001369_400 Hb_000819_070 Hb_000819_070 Hb_000281_230--Hb_000819_070 Hb_000318_490 Hb_000318_490 Hb_000281_230--Hb_000318_490 Hb_000281_230--Hb_004223_260 Hb_004223_260--Hb_000819_070 Hb_003349_070 Hb_003349_070 Hb_004223_260--Hb_003349_070 Hb_004223_260--Hb_000106_100 Hb_000780_210 Hb_000780_210 Hb_004223_260--Hb_000780_210 Hb_006718_010 Hb_006718_010 Hb_004223_260--Hb_006718_010 Hb_001623_430 Hb_001623_430 Hb_004223_260--Hb_001623_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0904775 0.18893 0.265091
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.19963 1.17792 0.98344 0.197211 0

CAGE analysis