Hb_140049_060

Information

Type -
Description -
Location Contig140049: 29796-30989
Sequence    

Annotation

kegg
ID rcu:RCOM_0911710
description lipid binding protein, putative
nr
ID XP_012069671.1
description PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
swissprot
ID O64864
description Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1
trembl
ID A0A067KZ52
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02201 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_140049_060 0.0 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
2 Hb_000500_160 0.0642138262 - - hypothetical protein CISIN_1g039640mg, partial [Citrus sinensis]
3 Hb_069151_010 0.1051646825 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium raimondii]
4 Hb_008775_050 0.1071560541 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
5 Hb_000668_070 0.1097121782 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000057_210 0.1358146407 - - hypothetical protein JCGZ_06274 [Jatropha curcas]
7 Hb_187211_010 0.1447269075 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
8 Hb_002989_030 0.1540838089 - - PREDICTED: protein GAST1-like [Populus euphratica]
9 Hb_000625_130 0.1586929897 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
10 Hb_007320_050 0.1634889769 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
11 Hb_004162_310 0.1635533021 - - tonoplast intrinsic protein, putative [Ricinus communis]
12 Hb_014749_010 0.1637263025 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
13 Hb_003166_020 0.1639124352 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
14 Hb_003480_010 0.1645264335 - - cytochrome P450 family protein [Populus trichocarpa]
15 Hb_002659_020 0.1661281792 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
16 Hb_009659_060 0.1664959154 - - cell wall invertase [Manihot esculenta]
17 Hb_027242_010 0.1686498635 - - PREDICTED: pathogenesis-related protein 1-like [Populus euphratica]
18 Hb_000800_060 0.1698631838 - - hypothetical protein POPTR_0008s02870g [Populus trichocarpa]
19 Hb_032621_010 0.1703298506 - - hypothetical protein PHAVU_006G197300g [Phaseolus vulgaris]
20 Hb_000560_050 0.170479955 - - hypothetical protein JCGZ_05738 [Jatropha curcas]

Gene co-expression network

sample Hb_140049_060 Hb_140049_060 Hb_000500_160 Hb_000500_160 Hb_140049_060--Hb_000500_160 Hb_069151_010 Hb_069151_010 Hb_140049_060--Hb_069151_010 Hb_008775_050 Hb_008775_050 Hb_140049_060--Hb_008775_050 Hb_000668_070 Hb_000668_070 Hb_140049_060--Hb_000668_070 Hb_000057_210 Hb_000057_210 Hb_140049_060--Hb_000057_210 Hb_187211_010 Hb_187211_010 Hb_140049_060--Hb_187211_010 Hb_000500_160--Hb_008775_050 Hb_014749_010 Hb_014749_010 Hb_000500_160--Hb_014749_010 Hb_007320_050 Hb_007320_050 Hb_000500_160--Hb_007320_050 Hb_004162_310 Hb_004162_310 Hb_000500_160--Hb_004162_310 Hb_002659_020 Hb_002659_020 Hb_000500_160--Hb_002659_020 Hb_069151_010--Hb_000668_070 Hb_000800_060 Hb_000800_060 Hb_069151_010--Hb_000800_060 Hb_090510_010 Hb_090510_010 Hb_069151_010--Hb_090510_010 Hb_055154_010 Hb_055154_010 Hb_069151_010--Hb_055154_010 Hb_003166_020 Hb_003166_020 Hb_069151_010--Hb_003166_020 Hb_000560_050 Hb_000560_050 Hb_008775_050--Hb_000560_050 Hb_008775_050--Hb_014749_010 Hb_038135_010 Hb_038135_010 Hb_008775_050--Hb_038135_010 Hb_008775_050--Hb_007320_050 Hb_019708_010 Hb_019708_010 Hb_008775_050--Hb_019708_010 Hb_000668_070--Hb_000800_060 Hb_050898_020 Hb_050898_020 Hb_000668_070--Hb_050898_020 Hb_124625_010 Hb_124625_010 Hb_000668_070--Hb_124625_010 Hb_005396_010 Hb_005396_010 Hb_000668_070--Hb_005396_010 Hb_000668_070--Hb_090510_010 Hb_003480_010 Hb_003480_010 Hb_000057_210--Hb_003480_010 Hb_003119_120 Hb_003119_120 Hb_000057_210--Hb_003119_120 Hb_027242_010 Hb_027242_010 Hb_000057_210--Hb_027242_010 Hb_000057_210--Hb_187211_010 Hb_027028_010 Hb_027028_010 Hb_000057_210--Hb_027028_010 Hb_001377_480 Hb_001377_480 Hb_187211_010--Hb_001377_480 Hb_001789_010 Hb_001789_010 Hb_187211_010--Hb_001789_010 Hb_001101_020 Hb_001101_020 Hb_187211_010--Hb_001101_020 Hb_111985_120 Hb_111985_120 Hb_187211_010--Hb_111985_120 Hb_000625_130 Hb_000625_130 Hb_187211_010--Hb_000625_130 Hb_142522_030 Hb_142522_030 Hb_187211_010--Hb_142522_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.269818 0.0574017 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.767509 0

CAGE analysis