Hb_124625_010

Information

Type -
Description -
Location Contig124625: 112-1149
Sequence    

Annotation

kegg
ID rcu:RCOM_1020330
description beta-glucosidase, putative (EC:3.2.1.21)
nr
ID KDP39385.1
description hypothetical protein JCGZ_01142 [Jatropha curcas]
swissprot
ID Q7XSK0
description Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=3 SV=2
trembl
ID A0A067L4F8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01142 PE=3 SV=1
Gene Ontology
ID GO:0004553
description beta-glucosidase 18-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_124625_010 0.0 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
2 Hb_005396_010 0.0275686249 - - PREDICTED: interleukin enhancer-binding factor 3-B-like [Jatropha curcas]
3 Hb_050898_020 0.0428181765 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
4 Hb_000800_060 0.0538093599 - - hypothetical protein POPTR_0008s02870g [Populus trichocarpa]
5 Hb_090510_010 0.0642520747 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
6 Hb_000668_070 0.076570398 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002966_030 0.0904292418 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002747_010 0.0927509624 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
9 Hb_000772_070 0.1123727059 - - PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
10 Hb_153457_010 0.1186746284 - - Miraculin precursor, putative [Ricinus communis]
11 Hb_069151_010 0.1187600929 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium raimondii]
12 Hb_003166_020 0.1210343591 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
13 Hb_012779_010 0.1265459333 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
14 Hb_007320_040 0.1273059556 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
15 Hb_001053_010 0.1374508145 - - PREDICTED: polygalacturonase-like [Jatropha curcas]
16 Hb_032621_010 0.1398818929 - - hypothetical protein PHAVU_006G197300g [Phaseolus vulgaris]
17 Hb_007897_040 0.1411400872 - - ATP binding protein, putative [Ricinus communis]
18 Hb_035583_010 0.1417707124 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
19 Hb_026650_010 0.1434830113 - - nitrate transporter, putative [Ricinus communis]
20 Hb_055154_010 0.1511373004 - - PREDICTED: laccase-7 [Jatropha curcas]

Gene co-expression network

sample Hb_124625_010 Hb_124625_010 Hb_005396_010 Hb_005396_010 Hb_124625_010--Hb_005396_010 Hb_050898_020 Hb_050898_020 Hb_124625_010--Hb_050898_020 Hb_000800_060 Hb_000800_060 Hb_124625_010--Hb_000800_060 Hb_090510_010 Hb_090510_010 Hb_124625_010--Hb_090510_010 Hb_000668_070 Hb_000668_070 Hb_124625_010--Hb_000668_070 Hb_002966_030 Hb_002966_030 Hb_124625_010--Hb_002966_030 Hb_005396_010--Hb_000800_060 Hb_005396_010--Hb_090510_010 Hb_005396_010--Hb_050898_020 Hb_005396_010--Hb_000668_070 Hb_002747_010 Hb_002747_010 Hb_005396_010--Hb_002747_010 Hb_050898_020--Hb_000668_070 Hb_000772_070 Hb_000772_070 Hb_050898_020--Hb_000772_070 Hb_050898_020--Hb_000800_060 Hb_050898_020--Hb_002966_030 Hb_000800_060--Hb_090510_010 Hb_000800_060--Hb_000668_070 Hb_069151_010 Hb_069151_010 Hb_000800_060--Hb_069151_010 Hb_090510_010--Hb_069151_010 Hb_055154_010 Hb_055154_010 Hb_090510_010--Hb_055154_010 Hb_090510_010--Hb_000668_070 Hb_000668_070--Hb_069151_010 Hb_002966_030--Hb_002747_010 Hb_153457_010 Hb_153457_010 Hb_002966_030--Hb_153457_010 Hb_007320_040 Hb_007320_040 Hb_002966_030--Hb_007320_040 Hb_175167_020 Hb_175167_020 Hb_002966_030--Hb_175167_020 Hb_012779_010 Hb_012779_010 Hb_002966_030--Hb_012779_010 Hb_177880_010 Hb_177880_010 Hb_002966_030--Hb_177880_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.051255 0.0629794 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.375111 0

CAGE analysis