Hb_000772_070

Information

Type -
Description -
Location Contig772: 157910-158872
Sequence    

Annotation

kegg
ID rcu:RCOM_1250590
description hypothetical protein
nr
ID XP_012091815.1
description PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JED4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21599 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000772_070 0.0 - - PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
2 Hb_050898_020 0.0794691999 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
3 Hb_007320_040 0.1081656154 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
4 Hb_124625_010 0.1123727059 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
5 Hb_000668_070 0.1204281855 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012532_020 0.1209747195 - - Isoflavone reductase, putative [Ricinus communis]
7 Hb_000836_400 0.1211597057 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 1 [Jatropha curcas]
8 Hb_001053_010 0.1256825615 - - PREDICTED: polygalacturonase-like [Jatropha curcas]
9 Hb_015146_010 0.1264494669 - - -
10 Hb_002966_030 0.1278701232 - - conserved hypothetical protein [Ricinus communis]
11 Hb_177880_010 0.1317050864 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
12 Hb_005396_010 0.1358937678 - - PREDICTED: interleukin enhancer-binding factor 3-B-like [Jatropha curcas]
13 Hb_004834_020 0.1383805778 - - major allergen Pru ar 1-like [Jatropha curcas]
14 Hb_007897_040 0.1389920345 - - ATP binding protein, putative [Ricinus communis]
15 Hb_005614_040 0.1448327578 - - unnamed protein product [Coffea canephora]
16 Hb_000059_100 0.1463327123 - - Basic blue protein, putative [Ricinus communis]
17 Hb_002747_010 0.1464030303 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
18 Hb_000069_050 0.1498362666 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
19 Hb_185391_010 0.1503835675 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
20 Hb_000800_060 0.1525892172 - - hypothetical protein POPTR_0008s02870g [Populus trichocarpa]

Gene co-expression network

sample Hb_000772_070 Hb_000772_070 Hb_050898_020 Hb_050898_020 Hb_000772_070--Hb_050898_020 Hb_007320_040 Hb_007320_040 Hb_000772_070--Hb_007320_040 Hb_124625_010 Hb_124625_010 Hb_000772_070--Hb_124625_010 Hb_000668_070 Hb_000668_070 Hb_000772_070--Hb_000668_070 Hb_012532_020 Hb_012532_020 Hb_000772_070--Hb_012532_020 Hb_000836_400 Hb_000836_400 Hb_000772_070--Hb_000836_400 Hb_050898_020--Hb_124625_010 Hb_005396_010 Hb_005396_010 Hb_050898_020--Hb_005396_010 Hb_050898_020--Hb_000668_070 Hb_000800_060 Hb_000800_060 Hb_050898_020--Hb_000800_060 Hb_002966_030 Hb_002966_030 Hb_050898_020--Hb_002966_030 Hb_177880_010 Hb_177880_010 Hb_007320_040--Hb_177880_010 Hb_004834_020 Hb_004834_020 Hb_007320_040--Hb_004834_020 Hb_007320_040--Hb_002966_030 Hb_126535_010 Hb_126535_010 Hb_007320_040--Hb_126535_010 Hb_124247_030 Hb_124247_030 Hb_007320_040--Hb_124247_030 Hb_002747_010 Hb_002747_010 Hb_007320_040--Hb_002747_010 Hb_124625_010--Hb_005396_010 Hb_124625_010--Hb_000800_060 Hb_090510_010 Hb_090510_010 Hb_124625_010--Hb_090510_010 Hb_124625_010--Hb_000668_070 Hb_124625_010--Hb_002966_030 Hb_069151_010 Hb_069151_010 Hb_000668_070--Hb_069151_010 Hb_000668_070--Hb_000800_060 Hb_000668_070--Hb_005396_010 Hb_000668_070--Hb_090510_010 Hb_000127_250 Hb_000127_250 Hb_012532_020--Hb_000127_250 Hb_000059_100 Hb_000059_100 Hb_012532_020--Hb_000059_100 Hb_000487_150 Hb_000487_150 Hb_012532_020--Hb_000487_150 Hb_012532_020--Hb_007320_040 Hb_185391_010 Hb_185391_010 Hb_012532_020--Hb_185391_010 Hb_012532_020--Hb_177880_010 Hb_015146_010 Hb_015146_010 Hb_000836_400--Hb_015146_010 Hb_010697_030 Hb_010697_030 Hb_000836_400--Hb_010697_030 Hb_005614_040 Hb_005614_040 Hb_000836_400--Hb_005614_040 Hb_000069_050 Hb_000069_050 Hb_000836_400--Hb_000069_050 Hb_007483_040 Hb_007483_040 Hb_000836_400--Hb_007483_040 Hb_000836_400--Hb_000059_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0925099 0 1.55434 1.17011 0.028929 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 14.915 0

CAGE analysis