Hb_015146_010

Information

Type -
Description -
Location Contig15146: 13171-15163
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015146_010 0.0 - - -
2 Hb_185391_010 0.0652130846 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
3 Hb_000836_400 0.0698570764 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 1 [Jatropha curcas]
4 Hb_000127_250 0.0839623223 - - Alliin lyase precursor, putative [Ricinus communis]
5 Hb_005614_040 0.0959657756 - - unnamed protein product [Coffea canephora]
6 Hb_000958_180 0.0980439161 - - hypothetical protein CISIN_1g043061mg, partial [Citrus sinensis]
7 Hb_012532_020 0.1009752486 - - Isoflavone reductase, putative [Ricinus communis]
8 Hb_010697_030 0.1024227843 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
9 Hb_007483_040 0.1026815119 - - PREDICTED: protein SRG1-like [Jatropha curcas]
10 Hb_003857_010 0.1037610627 - - conserved hypothetical protein [Ricinus communis]
11 Hb_058620_050 0.1038028724 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
12 Hb_001142_040 0.1038494011 - - PREDICTED: protein YLS9 [Jatropha curcas]
13 Hb_002184_040 0.1039273083 transcription factor TF Family: bHLH transcription factor, putative [Ricinus communis]
14 Hb_007926_020 0.1042630494 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP6 [Jatropha curcas]
15 Hb_148986_010 0.1044534147 - - unnamed protein product [Vitis vinifera]
16 Hb_019392_010 0.1063540882 - - PREDICTED: LOW QUALITY PROTEIN: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
17 Hb_001652_060 0.1096456943 - - PREDICTED: uncharacterized protein LOC103404034 [Malus domestica]
18 Hb_020480_050 0.1148887833 - - putative wall-associated kinase family protein [Populus trichocarpa]
19 Hb_000059_100 0.1152874703 - - Basic blue protein, putative [Ricinus communis]
20 Hb_058620_040 0.1157907955 - - Myrcene synthase, chloroplastic, putative isoform 1 [Theobroma cacao]

Gene co-expression network

sample Hb_015146_010 Hb_015146_010 Hb_185391_010 Hb_185391_010 Hb_015146_010--Hb_185391_010 Hb_000836_400 Hb_000836_400 Hb_015146_010--Hb_000836_400 Hb_000127_250 Hb_000127_250 Hb_015146_010--Hb_000127_250 Hb_005614_040 Hb_005614_040 Hb_015146_010--Hb_005614_040 Hb_000958_180 Hb_000958_180 Hb_015146_010--Hb_000958_180 Hb_012532_020 Hb_012532_020 Hb_015146_010--Hb_012532_020 Hb_185391_010--Hb_000958_180 Hb_019392_010 Hb_019392_010 Hb_185391_010--Hb_019392_010 Hb_058620_050 Hb_058620_050 Hb_185391_010--Hb_058620_050 Hb_148986_010 Hb_148986_010 Hb_185391_010--Hb_148986_010 Hb_185391_010--Hb_005614_040 Hb_010697_030 Hb_010697_030 Hb_000836_400--Hb_010697_030 Hb_000836_400--Hb_005614_040 Hb_000069_050 Hb_000069_050 Hb_000836_400--Hb_000069_050 Hb_007483_040 Hb_007483_040 Hb_000836_400--Hb_007483_040 Hb_000059_100 Hb_000059_100 Hb_000836_400--Hb_000059_100 Hb_000127_250--Hb_012532_020 Hb_003237_040 Hb_003237_040 Hb_000127_250--Hb_003237_040 Hb_000127_250--Hb_185391_010 Hb_000127_250--Hb_000059_100 Hb_000127_250--Hb_058620_050 Hb_005614_040--Hb_007483_040 Hb_005614_040--Hb_000059_100 Hb_000503_040 Hb_000503_040 Hb_005614_040--Hb_000503_040 Hb_009568_010 Hb_009568_010 Hb_005614_040--Hb_009568_010 Hb_001699_240 Hb_001699_240 Hb_005614_040--Hb_001699_240 Hb_000958_180--Hb_019392_010 Hb_001266_110 Hb_001266_110 Hb_000958_180--Hb_001266_110 Hb_006925_010 Hb_006925_010 Hb_000958_180--Hb_006925_010 Hb_000086_710 Hb_000086_710 Hb_000958_180--Hb_000086_710 Hb_000958_180--Hb_058620_050 Hb_012532_020--Hb_000059_100 Hb_000487_150 Hb_000487_150 Hb_012532_020--Hb_000487_150 Hb_007320_040 Hb_007320_040 Hb_012532_020--Hb_007320_040 Hb_012532_020--Hb_185391_010 Hb_177880_010 Hb_177880_010 Hb_012532_020--Hb_177880_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.251048 0.0961928 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.15629 0

CAGE analysis