Hb_005614_040

Information

Type -
Description -
Location Contig5614: 49229-55097
Sequence    

Annotation

kegg
ID pxb:103959007
description cationic peroxidase 1-like
nr
ID CDP06406.1
description unnamed protein product [Coffea canephora]
swissprot
ID P22195
description Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2
trembl
ID A0A068UD44
description Peroxidase OS=Coffea canephora GN=GSCOC_T00023239001 PE=3 SV=1
Gene Ontology
ID GO:0005576
description cationic peroxidase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005614_040 0.0 - - unnamed protein product [Coffea canephora]
2 Hb_007483_040 0.0609425749 - - PREDICTED: protein SRG1-like [Jatropha curcas]
3 Hb_000059_100 0.0637091619 - - Basic blue protein, putative [Ricinus communis]
4 Hb_000503_040 0.0654605849 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
5 Hb_009568_010 0.0675144697 - - hypothetical protein POPTR_0001s46700g [Populus trichocarpa]
6 Hb_001699_240 0.0713814206 - - PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Jatropha curcas]
7 Hb_185391_010 0.0763665776 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
8 Hb_010697_030 0.0788062482 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
9 Hb_058620_050 0.0803459392 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
10 Hb_000836_400 0.0826148589 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 1 [Jatropha curcas]
11 Hb_000141_070 0.0832073295 - - l-lactate dehydrogenase, putative [Ricinus communis]
12 Hb_000712_070 0.0842345265 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002818_080 0.0866806189 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA20, putative [Ricinus communis]
14 Hb_003090_070 0.0871856373 - - PREDICTED: laccase-7 [Jatropha curcas]
15 Hb_004693_010 0.0877329479 - - hypothetical protein JCGZ_02321 [Jatropha curcas]
16 Hb_020480_050 0.0907448369 - - putative wall-associated kinase family protein [Populus trichocarpa]
17 Hb_000958_180 0.0913365282 - - hypothetical protein CISIN_1g043061mg, partial [Citrus sinensis]
18 Hb_002805_230 0.0916430911 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
19 Hb_025490_030 0.0931504443 - - PREDICTED: uncharacterized protein LOC105629177 [Jatropha curcas]
20 Hb_015146_010 0.0959657756 - - -

Gene co-expression network

sample Hb_005614_040 Hb_005614_040 Hb_007483_040 Hb_007483_040 Hb_005614_040--Hb_007483_040 Hb_000059_100 Hb_000059_100 Hb_005614_040--Hb_000059_100 Hb_000503_040 Hb_000503_040 Hb_005614_040--Hb_000503_040 Hb_009568_010 Hb_009568_010 Hb_005614_040--Hb_009568_010 Hb_001699_240 Hb_001699_240 Hb_005614_040--Hb_001699_240 Hb_185391_010 Hb_185391_010 Hb_005614_040--Hb_185391_010 Hb_010697_030 Hb_010697_030 Hb_007483_040--Hb_010697_030 Hb_020480_050 Hb_020480_050 Hb_007483_040--Hb_020480_050 Hb_007483_040--Hb_009568_010 Hb_000141_070 Hb_000141_070 Hb_007483_040--Hb_000141_070 Hb_003334_080 Hb_003334_080 Hb_007483_040--Hb_003334_080 Hb_000712_070 Hb_000712_070 Hb_007483_040--Hb_000712_070 Hb_003090_070 Hb_003090_070 Hb_000059_100--Hb_003090_070 Hb_002805_230 Hb_002805_230 Hb_000059_100--Hb_002805_230 Hb_004693_010 Hb_004693_010 Hb_000059_100--Hb_004693_010 Hb_000318_440 Hb_000318_440 Hb_000059_100--Hb_000318_440 Hb_007532_050 Hb_007532_050 Hb_000059_100--Hb_007532_050 Hb_001901_090 Hb_001901_090 Hb_000503_040--Hb_001901_090 Hb_000503_040--Hb_007483_040 Hb_000503_040--Hb_010697_030 Hb_000503_040--Hb_000712_070 Hb_000503_040--Hb_001699_240 Hb_009568_010--Hb_000141_070 Hb_009568_010--Hb_003334_080 Hb_000446_100 Hb_000446_100 Hb_009568_010--Hb_000446_100 Hb_001456_040 Hb_001456_040 Hb_009568_010--Hb_001456_040 Hb_009568_010--Hb_020480_050 Hb_002818_080 Hb_002818_080 Hb_001699_240--Hb_002818_080 Hb_001699_240--Hb_002805_230 Hb_001699_240--Hb_007483_040 Hb_001699_240--Hb_000712_070 Hb_000958_180 Hb_000958_180 Hb_185391_010--Hb_000958_180 Hb_015146_010 Hb_015146_010 Hb_185391_010--Hb_015146_010 Hb_019392_010 Hb_019392_010 Hb_185391_010--Hb_019392_010 Hb_058620_050 Hb_058620_050 Hb_185391_010--Hb_058620_050 Hb_148986_010 Hb_148986_010 Hb_185391_010--Hb_148986_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0395682 0.132744 0.162417 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.68098 0

CAGE analysis