Hb_175167_020

Information

Type -
Description -
Location Contig175167: 18965-19408
Sequence    

Annotation

kegg
ID rcu:RCOM_0619250
description hypothetical protein
nr
ID XP_002528857.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SS88
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0619250 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_175167_020 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_153457_010 0.0493177929 - - Miraculin precursor, putative [Ricinus communis]
3 Hb_126535_010 0.0546379393 - - hypothetical protein JCGZ_09554 [Jatropha curcas]
4 Hb_000513_100 0.0666920899 - - germin-like protein GLP, partial [Manihot esculenta]
5 Hb_002966_030 0.0700274654 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002747_010 0.0704461176 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
7 Hb_028008_010 0.0737572729 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
8 Hb_012779_010 0.075427113 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
9 Hb_177880_010 0.08132509 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
10 Hb_004834_020 0.0827684622 - - major allergen Pru ar 1-like [Jatropha curcas]
11 Hb_007320_040 0.0916993679 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
12 Hb_124247_030 0.0994945445 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Jatropha curcas]
13 Hb_054102_010 0.0996019442 - - abhydrolase domain containing, putative [Ricinus communis]
14 Hb_001213_010 0.0997532069 - - PREDICTED: laccase-7 [Jatropha curcas]
15 Hb_148383_010 0.100446673 - - PREDICTED: protein YLS9 [Jatropha curcas]
16 Hb_006153_190 0.1020713906 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
17 Hb_000576_080 0.1025817579 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000720_010 0.1056789084 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
19 Hb_002521_010 0.1082777077 - - cinnamate 4-hydroxylase, putative [Ricinus communis]
20 Hb_011161_060 0.1178035738 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]

Gene co-expression network

sample Hb_175167_020 Hb_175167_020 Hb_153457_010 Hb_153457_010 Hb_175167_020--Hb_153457_010 Hb_126535_010 Hb_126535_010 Hb_175167_020--Hb_126535_010 Hb_000513_100 Hb_000513_100 Hb_175167_020--Hb_000513_100 Hb_002966_030 Hb_002966_030 Hb_175167_020--Hb_002966_030 Hb_002747_010 Hb_002747_010 Hb_175167_020--Hb_002747_010 Hb_028008_010 Hb_028008_010 Hb_175167_020--Hb_028008_010 Hb_153457_010--Hb_002747_010 Hb_012779_010 Hb_012779_010 Hb_153457_010--Hb_012779_010 Hb_153457_010--Hb_002966_030 Hb_153457_010--Hb_000513_100 Hb_153457_010--Hb_028008_010 Hb_177880_010 Hb_177880_010 Hb_126535_010--Hb_177880_010 Hb_004834_020 Hb_004834_020 Hb_126535_010--Hb_004834_020 Hb_124247_030 Hb_124247_030 Hb_126535_010--Hb_124247_030 Hb_007320_040 Hb_007320_040 Hb_126535_010--Hb_007320_040 Hb_011161_060 Hb_011161_060 Hb_126535_010--Hb_011161_060 Hb_000513_100--Hb_028008_010 Hb_000513_100--Hb_012779_010 Hb_001189_030 Hb_001189_030 Hb_000513_100--Hb_001189_030 Hb_000513_100--Hb_002747_010 Hb_002966_030--Hb_002747_010 Hb_002966_030--Hb_007320_040 Hb_002966_030--Hb_012779_010 Hb_002966_030--Hb_177880_010 Hb_002747_010--Hb_012779_010 Hb_002747_010--Hb_007320_040 Hb_002521_010 Hb_002521_010 Hb_028008_010--Hb_002521_010 Hb_000021_090 Hb_000021_090 Hb_028008_010--Hb_000021_090 Hb_028008_010--Hb_002966_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0542044 0.412895 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.28445 0

CAGE analysis