Hb_012779_010

Information

Type -
Description -
Location Contig12779: 11581-13266
Sequence    

Annotation

kegg
ID rcu:RCOM_1617460
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID KDP20096.1
description hypothetical protein JCGZ_05865 [Jatropha curcas]
swissprot
ID H2DH18
description Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV=1
trembl
ID A0A067J8K5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05865 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp736a12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08518: 11806-12908
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012779_010 0.0 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
2 Hb_153457_010 0.0350545603 - - Miraculin precursor, putative [Ricinus communis]
3 Hb_002747_010 0.0470739264 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
4 Hb_000513_100 0.0625993076 - - germin-like protein GLP, partial [Manihot esculenta]
5 Hb_002966_030 0.0709165223 - - conserved hypothetical protein [Ricinus communis]
6 Hb_175167_020 0.075427113 - - conserved hypothetical protein [Ricinus communis]
7 Hb_028008_010 0.100151527 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
8 Hb_001189_030 0.10843079 - - hypothetical protein RCOM_1341480 [Ricinus communis]
9 Hb_000297_180 0.1220075329 - - Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
10 Hb_005396_010 0.1262834996 - - PREDICTED: interleukin enhancer-binding factor 3-B-like [Jatropha curcas]
11 Hb_124625_010 0.1265459333 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
12 Hb_126535_010 0.1268605221 - - hypothetical protein JCGZ_09554 [Jatropha curcas]
13 Hb_007320_040 0.1318697976 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
14 Hb_177880_010 0.1371164032 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
15 Hb_004834_020 0.1376204531 - - major allergen Pru ar 1-like [Jatropha curcas]
16 Hb_002521_010 0.1402693528 - - cinnamate 4-hydroxylase, putative [Ricinus communis]
17 Hb_000576_080 0.145520947 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000115_180 0.1458401503 - - hypothetical protein RCOM_1308310 [Ricinus communis]
19 Hb_001863_050 0.1466487768 - - PREDICTED: wall-associated receptor kinase-like 8 [Jatropha curcas]
20 Hb_007897_040 0.1470889428 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_012779_010 Hb_012779_010 Hb_153457_010 Hb_153457_010 Hb_012779_010--Hb_153457_010 Hb_002747_010 Hb_002747_010 Hb_012779_010--Hb_002747_010 Hb_000513_100 Hb_000513_100 Hb_012779_010--Hb_000513_100 Hb_002966_030 Hb_002966_030 Hb_012779_010--Hb_002966_030 Hb_175167_020 Hb_175167_020 Hb_012779_010--Hb_175167_020 Hb_028008_010 Hb_028008_010 Hb_012779_010--Hb_028008_010 Hb_153457_010--Hb_002747_010 Hb_153457_010--Hb_002966_030 Hb_153457_010--Hb_175167_020 Hb_153457_010--Hb_000513_100 Hb_153457_010--Hb_028008_010 Hb_002747_010--Hb_002966_030 Hb_002747_010--Hb_175167_020 Hb_002747_010--Hb_000513_100 Hb_007320_040 Hb_007320_040 Hb_002747_010--Hb_007320_040 Hb_000513_100--Hb_028008_010 Hb_000513_100--Hb_175167_020 Hb_001189_030 Hb_001189_030 Hb_000513_100--Hb_001189_030 Hb_002966_030--Hb_007320_040 Hb_002966_030--Hb_175167_020 Hb_177880_010 Hb_177880_010 Hb_002966_030--Hb_177880_010 Hb_126535_010 Hb_126535_010 Hb_175167_020--Hb_126535_010 Hb_175167_020--Hb_028008_010 Hb_002521_010 Hb_002521_010 Hb_028008_010--Hb_002521_010 Hb_000021_090 Hb_000021_090 Hb_028008_010--Hb_000021_090 Hb_028008_010--Hb_002966_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0101546 0.0500971 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.195228 0

CAGE analysis