Hb_007320_050

Information

Type -
Description -
Location Contig7320: 54813-55767
Sequence    

Annotation

kegg
ID rcu:RCOM_1463260
description hypothetical protein
nr
ID XP_012076111.1
description PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KE93
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12797 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007320_050 0.0 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
2 Hb_004162_310 0.0063457536 - - tonoplast intrinsic protein, putative [Ricinus communis]
3 Hb_014749_010 0.0075836215 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
4 Hb_002659_020 0.0314092117 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
5 Hb_009659_060 0.0334404006 - - cell wall invertase [Manihot esculenta]
6 Hb_000560_050 0.0475222162 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
7 Hb_038135_010 0.0600618652 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
8 Hb_005389_180 0.0612039842 - - PREDICTED: uncharacterized protein LOC105762407 [Gossypium raimondii]
9 Hb_000383_030 0.063142034 - - -
10 Hb_019708_010 0.0641013931 - - -
11 Hb_000905_020 0.0726800377 - - PREDICTED: cytochrome P450 93A2-like [Jatropha curcas]
12 Hb_004324_140 0.0758412307 - - PREDICTED: uncharacterized protein LOC105648358 [Jatropha curcas]
13 Hb_184964_010 0.0765620464 - - -
14 Hb_002094_060 0.0775257859 - - -
15 Hb_005204_060 0.0787383712 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_119748_010 0.0822029337 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
17 Hb_002289_030 0.087048625 - - PREDICTED: uncharacterized protein LOC103957017 [Pyrus x bretschneideri]
18 Hb_009398_010 0.0883492218 - - Putative pectate lyase 2 [Glycine soja]
19 Hb_006533_010 0.1009003761 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
20 Hb_008775_050 0.1014594674 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]

Gene co-expression network

sample Hb_007320_050 Hb_007320_050 Hb_004162_310 Hb_004162_310 Hb_007320_050--Hb_004162_310 Hb_014749_010 Hb_014749_010 Hb_007320_050--Hb_014749_010 Hb_002659_020 Hb_002659_020 Hb_007320_050--Hb_002659_020 Hb_009659_060 Hb_009659_060 Hb_007320_050--Hb_009659_060 Hb_000560_050 Hb_000560_050 Hb_007320_050--Hb_000560_050 Hb_038135_010 Hb_038135_010 Hb_007320_050--Hb_038135_010 Hb_004162_310--Hb_014749_010 Hb_004162_310--Hb_002659_020 Hb_004162_310--Hb_009659_060 Hb_004162_310--Hb_000560_050 Hb_005389_180 Hb_005389_180 Hb_004162_310--Hb_005389_180 Hb_014749_010--Hb_002659_020 Hb_014749_010--Hb_000560_050 Hb_014749_010--Hb_009659_060 Hb_014749_010--Hb_038135_010 Hb_002659_020--Hb_009659_060 Hb_002659_020--Hb_005389_180 Hb_000383_030 Hb_000383_030 Hb_002659_020--Hb_000383_030 Hb_009659_060--Hb_005389_180 Hb_009659_060--Hb_000383_030 Hb_000905_020 Hb_000905_020 Hb_009659_060--Hb_000905_020 Hb_000560_050--Hb_038135_010 Hb_019708_010 Hb_019708_010 Hb_000560_050--Hb_019708_010 Hb_119748_010 Hb_119748_010 Hb_000560_050--Hb_119748_010 Hb_006533_010 Hb_006533_010 Hb_000560_050--Hb_006533_010 Hb_038135_010--Hb_019708_010 Hb_038135_010--Hb_119748_010 Hb_038135_010--Hb_006533_010 Hb_005066_060 Hb_005066_060 Hb_038135_010--Hb_005066_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0988602 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.283441 0

CAGE analysis