Hb_119748_010

Information

Type -
Description -
Location Contig119748: 3-819
Sequence    

Annotation

kegg
ID rcu:RCOM_0635620
description Flavonol synthase/flavanone 3-hydroxylase, putative (EC:1.14.11.23)
nr
ID XP_002519766.1
description Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
swissprot
ID D4N500
description Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1
trembl
ID B9S197
description Flavonol synthase/flavanone 3-hydroxylase, putative OS=Ricinus communis GN=RCOM_0635620 PE=3 SV=1
Gene Ontology
ID GO:0045431
description protein srg1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_119748_010 0.0 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
2 Hb_019708_010 0.0181683388 - - -
3 Hb_006533_010 0.0188133736 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
4 Hb_038135_010 0.0222170901 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
5 Hb_000560_050 0.0347729256 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
6 Hb_005066_060 0.0369633198 - - FAD-binding Berberine family protein, putative [Theobroma cacao]
7 Hb_012136_010 0.0374824243 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
8 Hb_005563_020 0.0699776392 transcription factor TF Family: Orphans hypothetical protein POPTR_0004s16810g, partial [Populus trichocarpa]
9 Hb_014749_010 0.0746489329 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
10 Hb_007320_050 0.0822029337 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
11 Hb_004162_310 0.088519929 - - tonoplast intrinsic protein, putative [Ricinus communis]
12 Hb_123560_010 0.0920057907 - - hypothetical protein JCGZ_12463 [Jatropha curcas]
13 Hb_078903_010 0.1098212519 - - Osmotin precursor, putative [Ricinus communis]
14 Hb_008775_050 0.1099167175 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
15 Hb_002659_020 0.1134365898 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
16 Hb_009659_060 0.1154536824 - - cell wall invertase [Manihot esculenta]
17 Hb_041362_010 0.1284156085 transcription factor TF Family: Tify JAZ8 [Hevea brasiliensis]
18 Hb_001652_060 0.1294295293 - - PREDICTED: uncharacterized protein LOC103404034 [Malus domestica]
19 Hb_000500_160 0.1339241781 - - hypothetical protein CISIN_1g039640mg, partial [Citrus sinensis]
20 Hb_005389_180 0.1429942749 - - PREDICTED: uncharacterized protein LOC105762407 [Gossypium raimondii]

Gene co-expression network

sample Hb_119748_010 Hb_119748_010 Hb_019708_010 Hb_019708_010 Hb_119748_010--Hb_019708_010 Hb_006533_010 Hb_006533_010 Hb_119748_010--Hb_006533_010 Hb_038135_010 Hb_038135_010 Hb_119748_010--Hb_038135_010 Hb_000560_050 Hb_000560_050 Hb_119748_010--Hb_000560_050 Hb_005066_060 Hb_005066_060 Hb_119748_010--Hb_005066_060 Hb_012136_010 Hb_012136_010 Hb_119748_010--Hb_012136_010 Hb_019708_010--Hb_038135_010 Hb_019708_010--Hb_000560_050 Hb_019708_010--Hb_006533_010 Hb_019708_010--Hb_005066_060 Hb_019708_010--Hb_012136_010 Hb_006533_010--Hb_005066_060 Hb_006533_010--Hb_012136_010 Hb_006533_010--Hb_038135_010 Hb_005563_020 Hb_005563_020 Hb_006533_010--Hb_005563_020 Hb_038135_010--Hb_000560_050 Hb_014749_010 Hb_014749_010 Hb_038135_010--Hb_014749_010 Hb_038135_010--Hb_005066_060 Hb_000560_050--Hb_014749_010 Hb_007320_050 Hb_007320_050 Hb_000560_050--Hb_007320_050 Hb_000560_050--Hb_006533_010 Hb_005066_060--Hb_012136_010 Hb_005066_060--Hb_005563_020 Hb_123560_010 Hb_123560_010 Hb_005066_060--Hb_123560_010 Hb_012136_010--Hb_005563_020 Hb_012136_010--Hb_123560_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.103996 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.477772 0

CAGE analysis