Hb_002659_020

Information

Type -
Description -
Location Contig2659: 11267-13935
Sequence    

Annotation

kegg
ID tcc:TCM_041885
description Cytochrome P450, putative
nr
ID XP_011038701.1
description PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
swissprot
ID Q2QYH7
description Cytochrome P450 714C2 OS=Oryza sativa subsp. japonica GN=CYP714C2 PE=2 SV=1
trembl
ID A0A061GXB3
description Cytochrome P450, putative OS=Theobroma cacao GN=TCM_041885 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 714c2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27748: 11994-12209 , PASA_asmbl_27749: 13283-13560
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002659_020 0.0 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
2 Hb_009659_060 0.0020322791 - - cell wall invertase [Manihot esculenta]
3 Hb_004162_310 0.0250661019 - - tonoplast intrinsic protein, putative [Ricinus communis]
4 Hb_005389_180 0.0298230474 - - PREDICTED: uncharacterized protein LOC105762407 [Gossypium raimondii]
5 Hb_007320_050 0.0314092117 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
6 Hb_000383_030 0.0317638168 - - -
7 Hb_014749_010 0.038987826 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
8 Hb_000905_020 0.0413166945 - - PREDICTED: cytochrome P450 93A2-like [Jatropha curcas]
9 Hb_004324_140 0.0444833543 - - PREDICTED: uncharacterized protein LOC105648358 [Jatropha curcas]
10 Hb_184964_010 0.0452054534 - - -
11 Hb_002094_060 0.0461709301 - - -
12 Hb_005204_060 0.0473857356 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_002289_030 0.0557122257 - - PREDICTED: uncharacterized protein LOC103957017 [Pyrus x bretschneideri]
14 Hb_009398_010 0.0570155229 - - Putative pectate lyase 2 [Glycine soja]
15 Hb_000560_050 0.0788643332 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
16 Hb_038135_010 0.0913710478 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
17 Hb_000022_210 0.0921668757 - - PREDICTED: uncharacterized protein LOC105638395 [Jatropha curcas]
18 Hb_019708_010 0.095398489 - - -
19 Hb_119748_010 0.1134365898 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_008775_050 0.1146506012 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]

Gene co-expression network

sample Hb_002659_020 Hb_002659_020 Hb_009659_060 Hb_009659_060 Hb_002659_020--Hb_009659_060 Hb_004162_310 Hb_004162_310 Hb_002659_020--Hb_004162_310 Hb_005389_180 Hb_005389_180 Hb_002659_020--Hb_005389_180 Hb_007320_050 Hb_007320_050 Hb_002659_020--Hb_007320_050 Hb_000383_030 Hb_000383_030 Hb_002659_020--Hb_000383_030 Hb_014749_010 Hb_014749_010 Hb_002659_020--Hb_014749_010 Hb_009659_060--Hb_004162_310 Hb_009659_060--Hb_005389_180 Hb_009659_060--Hb_000383_030 Hb_009659_060--Hb_007320_050 Hb_000905_020 Hb_000905_020 Hb_009659_060--Hb_000905_020 Hb_004162_310--Hb_007320_050 Hb_004162_310--Hb_014749_010 Hb_000560_050 Hb_000560_050 Hb_004162_310--Hb_000560_050 Hb_004162_310--Hb_005389_180 Hb_005389_180--Hb_000383_030 Hb_005389_180--Hb_000905_020 Hb_004324_140 Hb_004324_140 Hb_005389_180--Hb_004324_140 Hb_184964_010 Hb_184964_010 Hb_005389_180--Hb_184964_010 Hb_002094_060 Hb_002094_060 Hb_005389_180--Hb_002094_060 Hb_005204_060 Hb_005204_060 Hb_005389_180--Hb_005204_060 Hb_007320_050--Hb_014749_010 Hb_007320_050--Hb_000560_050 Hb_038135_010 Hb_038135_010 Hb_007320_050--Hb_038135_010 Hb_000383_030--Hb_000905_020 Hb_000383_030--Hb_004324_140 Hb_000383_030--Hb_184964_010 Hb_000383_030--Hb_002094_060 Hb_000383_030--Hb_005204_060 Hb_014749_010--Hb_000560_050 Hb_014749_010--Hb_009659_060 Hb_014749_010--Hb_038135_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.128438 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.312 0

CAGE analysis