Hb_009659_060

Information

Type -
Description -
Location Contig9659: 37699-40205
Sequence    

Annotation

kegg
ID rcu:RCOM_0655770
description Beta-fructofuranosidase, cell wall isozyme precursor, putative (EC:3.2.1.26)
nr
ID AFA46812.1
description cell wall invertase [Manihot esculenta]
swissprot
ID Q43866
description Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1
trembl
ID H6V7I5
description Cell wall invertase OS=Manihot esculenta GN=CWINV3 PE=2 SV=1
Gene Ontology
ID GO:0004553
description beta- cell wall isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009659_060 0.0 - - cell wall invertase [Manihot esculenta]
2 Hb_002659_020 0.0020322791 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
3 Hb_004162_310 0.0270976817 - - tonoplast intrinsic protein, putative [Ricinus communis]
4 Hb_005389_180 0.0277915665 - - PREDICTED: uncharacterized protein LOC105762407 [Gossypium raimondii]
5 Hb_000383_030 0.0297324451 - - -
6 Hb_007320_050 0.0334404006 - - PREDICTED: uncharacterized protein LOC105637288 [Jatropha curcas]
7 Hb_000905_020 0.039285958 - - PREDICTED: cytochrome P450 93A2-like [Jatropha curcas]
8 Hb_014749_010 0.0410184289 - - hypothetical protein JCGZ_26951 [Jatropha curcas]
9 Hb_004324_140 0.0424528634 - - PREDICTED: uncharacterized protein LOC105648358 [Jatropha curcas]
10 Hb_184964_010 0.0431750209 - - -
11 Hb_002094_060 0.0441405771 - - -
12 Hb_005204_060 0.0453554849 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_002289_030 0.053682743 - - PREDICTED: uncharacterized protein LOC103957017 [Pyrus x bretschneideri]
14 Hb_009398_010 0.0549861708 - - Putative pectate lyase 2 [Glycine soja]
15 Hb_000560_050 0.0808895624 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
16 Hb_000022_210 0.0901420647 - - PREDICTED: uncharacterized protein LOC105638395 [Jatropha curcas]
17 Hb_038135_010 0.0933937331 transcription factor TF Family: C2H2 Transcriptional regulator SUPERMAN, putative [Ricinus communis]
18 Hb_019708_010 0.097420261 - - -
19 Hb_119748_010 0.1154536824 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
20 Hb_008775_050 0.1157414838 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]

Gene co-expression network

sample Hb_009659_060 Hb_009659_060 Hb_002659_020 Hb_002659_020 Hb_009659_060--Hb_002659_020 Hb_004162_310 Hb_004162_310 Hb_009659_060--Hb_004162_310 Hb_005389_180 Hb_005389_180 Hb_009659_060--Hb_005389_180 Hb_000383_030 Hb_000383_030 Hb_009659_060--Hb_000383_030 Hb_007320_050 Hb_007320_050 Hb_009659_060--Hb_007320_050 Hb_000905_020 Hb_000905_020 Hb_009659_060--Hb_000905_020 Hb_002659_020--Hb_004162_310 Hb_002659_020--Hb_005389_180 Hb_002659_020--Hb_007320_050 Hb_002659_020--Hb_000383_030 Hb_014749_010 Hb_014749_010 Hb_002659_020--Hb_014749_010 Hb_004162_310--Hb_007320_050 Hb_004162_310--Hb_014749_010 Hb_000560_050 Hb_000560_050 Hb_004162_310--Hb_000560_050 Hb_004162_310--Hb_005389_180 Hb_005389_180--Hb_000383_030 Hb_005389_180--Hb_000905_020 Hb_004324_140 Hb_004324_140 Hb_005389_180--Hb_004324_140 Hb_184964_010 Hb_184964_010 Hb_005389_180--Hb_184964_010 Hb_002094_060 Hb_002094_060 Hb_005389_180--Hb_002094_060 Hb_005204_060 Hb_005204_060 Hb_005389_180--Hb_005204_060 Hb_000383_030--Hb_000905_020 Hb_000383_030--Hb_004324_140 Hb_000383_030--Hb_184964_010 Hb_000383_030--Hb_002094_060 Hb_000383_030--Hb_005204_060 Hb_007320_050--Hb_014749_010 Hb_007320_050--Hb_000560_050 Hb_038135_010 Hb_038135_010 Hb_007320_050--Hb_038135_010 Hb_000905_020--Hb_004324_140 Hb_000905_020--Hb_184964_010 Hb_000905_020--Hb_002094_060 Hb_000905_020--Hb_005204_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0208026 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0500047 0

CAGE analysis