Hb_134310_030

Information

Type -
Description -
Location Contig134310: 32603-35385
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP47063.1
description hypothetical protein JCGZ_10790 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LI34
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10790 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_134310_030 0.0 - - hypothetical protein JCGZ_10790 [Jatropha curcas]
2 Hb_001268_100 0.2885102941 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein KNUCKLES [Jatropha curcas]
3 Hb_000482_060 0.2914463386 transcription factor TF Family: LOB hypothetical protein JCGZ_07664 [Jatropha curcas]
4 Hb_107500_010 0.2956118953 - - -
5 Hb_027428_030 0.3010519778 - - unnamed protein product [Coffea canephora]
6 Hb_000173_480 0.3034249245 - - PREDICTED: calcium-binding protein 39 [Jatropha curcas]
7 Hb_000627_100 0.3046426405 - - -
8 Hb_161994_020 0.3091068037 - - -
9 Hb_020730_010 0.3110841133 - - hypothetical protein CICLE_v10010243mg, partial [Citrus clementina]
10 Hb_002835_250 0.3181660532 - - octicosapeptide/Phox/Bem1p domain-containing family protein [Populus trichocarpa]
11 Hb_001584_220 0.3205582783 - - galactinol synthase [Manihot esculenta]
12 Hb_000189_210 0.3261691828 - - hypothetical protein CICLE_v10005534mg [Citrus clementina]
13 Hb_002417_060 0.3278700718 - - Cell division cycle protein, putative [Ricinus communis]
14 Hb_000275_040 0.3326954522 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
15 Hb_003609_010 0.3344593196 - - -
16 Hb_001414_130 0.3402802384 - - PREDICTED: uncharacterized protein LOC105650390, partial [Jatropha curcas]
17 Hb_094101_010 0.340296407 - - hypothetical protein JCGZ_18414 [Jatropha curcas]
18 Hb_022693_050 0.3411870471 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
19 Hb_004088_060 0.341207911 - - hypothetical protein POPTR_0012s01875g [Populus trichocarpa]
20 Hb_002073_040 0.3413820024 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_134310_030 Hb_134310_030 Hb_001268_100 Hb_001268_100 Hb_134310_030--Hb_001268_100 Hb_000482_060 Hb_000482_060 Hb_134310_030--Hb_000482_060 Hb_107500_010 Hb_107500_010 Hb_134310_030--Hb_107500_010 Hb_027428_030 Hb_027428_030 Hb_134310_030--Hb_027428_030 Hb_000173_480 Hb_000173_480 Hb_134310_030--Hb_000173_480 Hb_000627_100 Hb_000627_100 Hb_134310_030--Hb_000627_100 Hb_001268_100--Hb_107500_010 Hb_122873_010 Hb_122873_010 Hb_001268_100--Hb_122873_010 Hb_004724_350 Hb_004724_350 Hb_001268_100--Hb_004724_350 Hb_002257_020 Hb_002257_020 Hb_001268_100--Hb_002257_020 Hb_000853_380 Hb_000853_380 Hb_001268_100--Hb_000853_380 Hb_000160_240 Hb_000160_240 Hb_000482_060--Hb_000160_240 Hb_003849_260 Hb_003849_260 Hb_000482_060--Hb_003849_260 Hb_003100_010 Hb_003100_010 Hb_000482_060--Hb_003100_010 Hb_000482_060--Hb_027428_030 Hb_000836_120 Hb_000836_120 Hb_000482_060--Hb_000836_120 Hb_002235_240 Hb_002235_240 Hb_000482_060--Hb_002235_240 Hb_107500_010--Hb_000853_380 Hb_000457_040 Hb_000457_040 Hb_107500_010--Hb_000457_040 Hb_107500_010--Hb_004724_350 Hb_002016_160 Hb_002016_160 Hb_107500_010--Hb_002016_160 Hb_027428_030--Hb_000173_480 Hb_000567_040 Hb_000567_040 Hb_027428_030--Hb_000567_040 Hb_002417_060 Hb_002417_060 Hb_027428_030--Hb_002417_060 Hb_020730_010 Hb_020730_010 Hb_027428_030--Hb_020730_010 Hb_002626_040 Hb_002626_040 Hb_027428_030--Hb_002626_040 Hb_010795_060 Hb_010795_060 Hb_027428_030--Hb_010795_060 Hb_001541_270 Hb_001541_270 Hb_000173_480--Hb_001541_270 Hb_000173_480--Hb_002626_040 Hb_146464_010 Hb_146464_010 Hb_000173_480--Hb_146464_010 Hb_006316_070 Hb_006316_070 Hb_000173_480--Hb_006316_070 Hb_000798_060 Hb_000798_060 Hb_000173_480--Hb_000798_060 Hb_004032_270 Hb_004032_270 Hb_000173_480--Hb_004032_270 Hb_000627_100--Hb_000567_040 Hb_000627_100--Hb_027428_030 Hb_000826_060 Hb_000826_060 Hb_000627_100--Hb_000826_060 Hb_018599_010 Hb_018599_010 Hb_000627_100--Hb_018599_010 Hb_002232_280 Hb_002232_280 Hb_000627_100--Hb_002232_280 Hb_036227_010 Hb_036227_010 Hb_000627_100--Hb_036227_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.352947 0.983299 0.0453196 0 0.403366 0.211422
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.137834 0.649683 0 0 0

CAGE analysis