Hb_010795_060

Information

Type -
Description -
Location Contig10795: 76616-78507
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010795_060 0.0 - - -
2 Hb_156593_050 0.139555564 - - PREDICTED: DNA-binding protein RHL1 isoform X1 [Jatropha curcas]
3 Hb_036790_130 0.2065179986 - - -
4 Hb_094022_010 0.2066299627 transcription factor TF Family: C2C2-GATA hypothetical protein JCGZ_05054 [Jatropha curcas]
5 Hb_000661_160 0.2108282059 - - hexokinase [Manihot esculenta]
6 Hb_000261_110 0.2151910466 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
7 Hb_000211_110 0.2173193513 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform X1 [Jatropha curcas]
8 Hb_009838_130 0.2215359059 - - hypothetical protein CISIN_1g010403mg [Citrus sinensis]
9 Hb_001922_130 0.22290133 - - hypothetical protein PHAVU_002G294300g [Phaseolus vulgaris]
10 Hb_000482_110 0.2231205264 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
11 Hb_004032_060 0.2250030888 - - elongation factor 1 gamma-like protein, partial [Ipomoea nil]
12 Hb_007747_060 0.2256631351 - - PREDICTED: mitochondrial fission protein ELM1 isoform X1 [Jatropha curcas]
13 Hb_004374_150 0.2256944618 - - PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
14 Hb_027428_030 0.227048811 - - unnamed protein product [Coffea canephora]
15 Hb_000186_260 0.2281055308 transcription factor TF Family: PHD PREDICTED: protein polybromo-1-like [Jatropha curcas]
16 Hb_000556_100 0.2286149014 - - PREDICTED: uncharacterized protein LOC104784782 isoform X2 [Camelina sativa]
17 Hb_006096_040 0.230351001 - - PREDICTED: COP9 signalosome complex subunit 8 [Jatropha curcas]
18 Hb_089889_020 0.2307220149 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At2g36080-like [Jatropha curcas]
19 Hb_001758_020 0.2310965989 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000313_300 0.2341747361 - - PREDICTED: F-box protein SKIP19-like [Jatropha curcas]

Gene co-expression network

sample Hb_010795_060 Hb_010795_060 Hb_156593_050 Hb_156593_050 Hb_010795_060--Hb_156593_050 Hb_036790_130 Hb_036790_130 Hb_010795_060--Hb_036790_130 Hb_094022_010 Hb_094022_010 Hb_010795_060--Hb_094022_010 Hb_000661_160 Hb_000661_160 Hb_010795_060--Hb_000661_160 Hb_000261_110 Hb_000261_110 Hb_010795_060--Hb_000261_110 Hb_000211_110 Hb_000211_110 Hb_010795_060--Hb_000211_110 Hb_012753_020 Hb_012753_020 Hb_156593_050--Hb_012753_020 Hb_156593_050--Hb_000661_160 Hb_156593_050--Hb_094022_010 Hb_156593_050--Hb_036790_130 Hb_007086_010 Hb_007086_010 Hb_156593_050--Hb_007086_010 Hb_000270_300 Hb_000270_300 Hb_036790_130--Hb_000270_300 Hb_000186_260 Hb_000186_260 Hb_036790_130--Hb_000186_260 Hb_000556_100 Hb_000556_100 Hb_036790_130--Hb_000556_100 Hb_005214_060 Hb_005214_060 Hb_036790_130--Hb_005214_060 Hb_005016_060 Hb_005016_060 Hb_036790_130--Hb_005016_060 Hb_002411_180 Hb_002411_180 Hb_036790_130--Hb_002411_180 Hb_000699_130 Hb_000699_130 Hb_094022_010--Hb_000699_130 Hb_003752_080 Hb_003752_080 Hb_094022_010--Hb_003752_080 Hb_000529_080 Hb_000529_080 Hb_094022_010--Hb_000529_080 Hb_000002_330 Hb_000002_330 Hb_094022_010--Hb_000002_330 Hb_000342_110 Hb_000342_110 Hb_094022_010--Hb_000342_110 Hb_007803_010 Hb_007803_010 Hb_094022_010--Hb_007803_010 Hb_000661_160--Hb_000211_110 Hb_000661_160--Hb_000261_110 Hb_009111_040 Hb_009111_040 Hb_000661_160--Hb_009111_040 Hb_000313_300 Hb_000313_300 Hb_000661_160--Hb_000313_300 Hb_000106_130 Hb_000106_130 Hb_000661_160--Hb_000106_130 Hb_004032_060 Hb_004032_060 Hb_000661_160--Hb_004032_060 Hb_001357_380 Hb_001357_380 Hb_000261_110--Hb_001357_380 Hb_000261_110--Hb_000313_300 Hb_017259_010 Hb_017259_010 Hb_000261_110--Hb_017259_010 Hb_012799_110 Hb_012799_110 Hb_000261_110--Hb_012799_110 Hb_033095_020 Hb_033095_020 Hb_000261_110--Hb_033095_020 Hb_001894_030 Hb_001894_030 Hb_000211_110--Hb_001894_030 Hb_000211_110--Hb_001357_380 Hb_000920_280 Hb_000920_280 Hb_000211_110--Hb_000920_280 Hb_000640_020 Hb_000640_020 Hb_000211_110--Hb_000640_020 Hb_011848_010 Hb_011848_010 Hb_000211_110--Hb_011848_010 Hb_000059_140 Hb_000059_140 Hb_000211_110--Hb_000059_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.251439 0.223341 0.271932 0.0527258 0.638237 0.404778
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.468991 0.184255 0 0.152118 0

CAGE analysis