Hb_000699_130

Information

Type -
Description -
Location Contig699: 93039-95922
Sequence    

Annotation

kegg
ID rcu:RCOM_0608090
description hypothetical protein
nr
ID XP_002521958.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8TCB7
description Methyltransferase-like protein 6 OS=Homo sapiens GN=METTL6 PE=2 SV=2
trembl
ID B9S7I9
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0608090 PE=4 SV=1
Gene Ontology
ID GO:0008168
description methyltransferase-like protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54680: 92990-94925 , PASA_asmbl_54681: 95260-95756 , PASA_asmbl_54683: 96333-100019
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000699_130 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_007919_060 0.0692901905 - - PREDICTED: UPF0047 protein C4A8.02c [Jatropha curcas]
3 Hb_001014_010 0.071951745 - - PREDICTED: uncharacterized protein LOC105647311 [Jatropha curcas]
4 Hb_022250_030 0.0776642786 - - conserved hypothetical protein [Ricinus communis]
5 Hb_005245_130 0.0805985155 - - PREDICTED: uncharacterized protein LOC105643730 [Jatropha curcas]
6 Hb_001124_120 0.0807515856 - - PREDICTED: uncharacterized protein LOC105631831 isoform X1 [Jatropha curcas]
7 Hb_031939_010 0.0827505149 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
8 Hb_000853_170 0.083761566 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
9 Hb_008406_160 0.0879478889 - - PREDICTED: ADP,ATP carrier protein 3, mitochondrial [Jatropha curcas]
10 Hb_000342_110 0.0896316128 - - PREDICTED: uncharacterized protein LOC105638174 [Jatropha curcas]
11 Hb_000265_150 0.0901154437 - - PREDICTED: uncharacterized protein LOC105643541 isoform X1 [Jatropha curcas]
12 Hb_150360_030 0.0911528585 - - PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Jatropha curcas]
13 Hb_000085_060 0.0916850661 - - PREDICTED: uncharacterized protein LOC105633020 [Jatropha curcas]
14 Hb_000462_140 0.0917089822 - - PREDICTED: dnaJ homolog subfamily C member 28 [Jatropha curcas]
15 Hb_001635_170 0.0918462066 - - hypothetical protein JCGZ_24811 [Jatropha curcas]
16 Hb_000879_140 0.0934160203 - - PREDICTED: uncharacterized protein DDB_G0283697-like isoform X2 [Jatropha curcas]
17 Hb_009838_090 0.0935773085 - - PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
18 Hb_000853_420 0.0945544523 - - PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Jatropha curcas]
19 Hb_005527_050 0.0946722359 - - PREDICTED: uncharacterized protein LOC105643024 [Jatropha curcas]
20 Hb_000803_300 0.0948510305 - - nuclear movement protein nudc, putative [Ricinus communis]

Gene co-expression network

sample Hb_000699_130 Hb_000699_130 Hb_007919_060 Hb_007919_060 Hb_000699_130--Hb_007919_060 Hb_001014_010 Hb_001014_010 Hb_000699_130--Hb_001014_010 Hb_022250_030 Hb_022250_030 Hb_000699_130--Hb_022250_030 Hb_005245_130 Hb_005245_130 Hb_000699_130--Hb_005245_130 Hb_001124_120 Hb_001124_120 Hb_000699_130--Hb_001124_120 Hb_031939_010 Hb_031939_010 Hb_000699_130--Hb_031939_010 Hb_007919_060--Hb_022250_030 Hb_001635_170 Hb_001635_170 Hb_007919_060--Hb_001635_170 Hb_086639_070 Hb_086639_070 Hb_007919_060--Hb_086639_070 Hb_070739_010 Hb_070739_010 Hb_007919_060--Hb_070739_010 Hb_000000_160 Hb_000000_160 Hb_007919_060--Hb_000000_160 Hb_012305_070 Hb_012305_070 Hb_001014_010--Hb_012305_070 Hb_000803_300 Hb_000803_300 Hb_001014_010--Hb_000803_300 Hb_001014_010--Hb_031939_010 Hb_008887_050 Hb_008887_050 Hb_001014_010--Hb_008887_050 Hb_000085_060 Hb_000085_060 Hb_001014_010--Hb_000085_060 Hb_002784_050 Hb_002784_050 Hb_022250_030--Hb_002784_050 Hb_022250_030--Hb_001635_170 Hb_000613_090 Hb_000613_090 Hb_022250_030--Hb_000613_090 Hb_000462_140 Hb_000462_140 Hb_022250_030--Hb_000462_140 Hb_004934_090 Hb_004934_090 Hb_005245_130--Hb_004934_090 Hb_003406_010 Hb_003406_010 Hb_005245_130--Hb_003406_010 Hb_005245_130--Hb_000803_300 Hb_004096_030 Hb_004096_030 Hb_005245_130--Hb_004096_030 Hb_005276_210 Hb_005276_210 Hb_005245_130--Hb_005276_210 Hb_005245_130--Hb_031939_010 Hb_001124_120--Hb_000085_060 Hb_150360_030 Hb_150360_030 Hb_001124_120--Hb_150360_030 Hb_002349_040 Hb_002349_040 Hb_001124_120--Hb_002349_040 Hb_001124_120--Hb_031939_010 Hb_007218_080 Hb_007218_080 Hb_001124_120--Hb_007218_080 Hb_011942_080 Hb_011942_080 Hb_031939_010--Hb_011942_080 Hb_031939_010--Hb_008887_050 Hb_000290_020 Hb_000290_020 Hb_031939_010--Hb_000290_020 Hb_003044_100 Hb_003044_100 Hb_031939_010--Hb_003044_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.7318 7.09077 5.83897 3.11546 16.6739 12.5447
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.9835 10.9604 6.67059 6.52923 3.82486

CAGE analysis