Hb_114310_060

Information

Type transcription factor
Description TF Family: ERF
Location Contig114310: 28501-29208
Sequence    

Annotation

kegg
ID rcu:RCOM_1596030
description Dehydration-responsive element-binding protein 2G, putative
nr
ID XP_002510462.1
description Dehydration-responsive element-binding protein 2G, putative [Ricinus communis]
swissprot
ID Q9LQZ2
description Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1
trembl
ID B9R819
description Dehydration-responsive element-binding protein 2G, putative OS=Ricinus communis GN=RCOM_1596030 PE=4 SV=1
Gene Ontology
ID GO:0005634
description dehydration-responsive element-binding protein 2d-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_114310_060 0.0 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 2G, putative [Ricinus communis]
2 Hb_012092_090 0.1771252711 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X2 [Jatropha curcas]
3 Hb_005162_140 0.1859654719 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 8 [Jatropha curcas]
4 Hb_002759_260 0.2106507192 - - PREDICTED: probable galacturonosyltransferase-like 9 [Jatropha curcas]
5 Hb_009189_050 0.2167073394 - - PREDICTED: uncharacterized protein LOC105648080 [Jatropha curcas]
6 Hb_012423_060 0.2319600895 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Jatropha curcas]
7 Hb_002284_080 0.2352082715 - - protein with unknown function [Ricinus communis]
8 Hb_014720_050 0.2353982159 - - PREDICTED: serine/threonine-protein kinase ATM-like [Jatropha curcas]
9 Hb_000371_120 0.2378100322 - - PREDICTED: calcium uniporter protein 2, mitochondrial-like [Jatropha curcas]
10 Hb_000813_160 0.2378955983 - - hypothetical protein PRUPE_ppa013181mg [Prunus persica]
11 Hb_011618_100 0.2417280055 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA1, putative [Ricinus communis]
12 Hb_001474_050 0.2426171272 transcription factor TF Family: C2C2-GATA GATA transcription factor, putative [Ricinus communis]
13 Hb_009862_020 0.2453285891 - - PREDICTED: uncharacterized protein LOC105650670 [Jatropha curcas]
14 Hb_001123_250 0.2461989908 - - hypothetical protein POPTR_0001s13220g [Populus trichocarpa]
15 Hb_002343_010 0.2466129543 - - amino acid binding protein, putative [Ricinus communis]
16 Hb_003849_190 0.2489562524 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
17 Hb_000028_500 0.2502828255 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
18 Hb_001486_200 0.2509090601 - - PREDICTED: uncharacterized protein LOC105632606 [Jatropha curcas]
19 Hb_001381_060 0.2512270361 - - monoxygenase, putative [Ricinus communis]
20 Hb_023344_110 0.2517885717 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Jatropha curcas]

Gene co-expression network

sample Hb_114310_060 Hb_114310_060 Hb_012092_090 Hb_012092_090 Hb_114310_060--Hb_012092_090 Hb_005162_140 Hb_005162_140 Hb_114310_060--Hb_005162_140 Hb_002759_260 Hb_002759_260 Hb_114310_060--Hb_002759_260 Hb_009189_050 Hb_009189_050 Hb_114310_060--Hb_009189_050 Hb_012423_060 Hb_012423_060 Hb_114310_060--Hb_012423_060 Hb_002284_080 Hb_002284_080 Hb_114310_060--Hb_002284_080 Hb_012092_090--Hb_005162_140 Hb_012092_090--Hb_002284_080 Hb_011618_100 Hb_011618_100 Hb_012092_090--Hb_011618_100 Hb_012092_090--Hb_012423_060 Hb_000123_220 Hb_000123_220 Hb_012092_090--Hb_000123_220 Hb_009862_020 Hb_009862_020 Hb_005162_140--Hb_009862_020 Hb_001474_050 Hb_001474_050 Hb_005162_140--Hb_001474_050 Hb_012762_040 Hb_012762_040 Hb_005162_140--Hb_012762_040 Hb_001250_080 Hb_001250_080 Hb_005162_140--Hb_001250_080 Hb_002343_010 Hb_002343_010 Hb_005162_140--Hb_002343_010 Hb_003687_130 Hb_003687_130 Hb_005162_140--Hb_003687_130 Hb_002875_070 Hb_002875_070 Hb_002759_260--Hb_002875_070 Hb_023344_110 Hb_023344_110 Hb_002759_260--Hb_023344_110 Hb_003849_190 Hb_003849_190 Hb_002759_260--Hb_003849_190 Hb_002450_030 Hb_002450_030 Hb_002759_260--Hb_002450_030 Hb_000042_330 Hb_000042_330 Hb_002759_260--Hb_000042_330 Hb_001511_190 Hb_001511_190 Hb_002759_260--Hb_001511_190 Hb_000371_120 Hb_000371_120 Hb_009189_050--Hb_000371_120 Hb_009189_050--Hb_001474_050 Hb_009189_050--Hb_002343_010 Hb_000077_160 Hb_000077_160 Hb_009189_050--Hb_000077_160 Hb_009189_050--Hb_002759_260 Hb_003209_090 Hb_003209_090 Hb_009189_050--Hb_003209_090 Hb_008747_010 Hb_008747_010 Hb_012423_060--Hb_008747_010 Hb_012423_060--Hb_002284_080 Hb_001381_060 Hb_001381_060 Hb_012423_060--Hb_001381_060 Hb_012423_060--Hb_011618_100 Hb_012423_060--Hb_002343_010 Hb_002000_090 Hb_002000_090 Hb_002284_080--Hb_002000_090 Hb_001433_160 Hb_001433_160 Hb_002284_080--Hb_001433_160 Hb_005054_020 Hb_005054_020 Hb_002284_080--Hb_005054_020 Hb_003710_020 Hb_003710_020 Hb_002284_080--Hb_003710_020 Hb_183086_070 Hb_183086_070 Hb_002284_080--Hb_183086_070 Hb_001353_020 Hb_001353_020 Hb_002284_080--Hb_001353_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0344976 0.198103 0.0798351 0.257849 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.062608 0.111857 0.025461 0.123997

CAGE analysis