Hb_106099_010

Information

Type -
Description -
Location Contig106099: 39-841
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106099_010 0.0 - - -
2 Hb_159582_010 0.1987372263 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
3 Hb_078081_010 0.2055093352 - - hypothetical protein PRUPE_ppa015726mg [Prunus persica]
4 Hb_002681_120 0.2089791181 - - PREDICTED: GDSL esterase/lipase At5g14450 [Jatropha curcas]
5 Hb_000300_420 0.2107091676 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
6 Hb_000236_190 0.212190924 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
7 Hb_032208_050 0.2122782891 - - PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X3 [Jatropha curcas]
8 Hb_003050_100 0.2130840829 - - PREDICTED: uncharacterized protein LOC105633987 [Jatropha curcas]
9 Hb_000011_380 0.2138501958 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]
10 Hb_001329_180 0.2150359917 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
11 Hb_002592_050 0.2154025044 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
12 Hb_001619_030 0.2176349262 - - annexin, putative [Ricinus communis]
13 Hb_007161_020 0.2180066741 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
14 Hb_179960_010 0.2205430869 - - PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Jatropha curcas]
15 Hb_003001_050 0.222363168 - - hypothetical protein RCOM_1749890 [Ricinus communis]
16 Hb_001775_070 0.226386871 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
17 Hb_001186_110 0.2286613136 - - hypothetical protein JCGZ_18389 [Jatropha curcas]
18 Hb_004958_010 0.2302094512 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001663_120 0.2316888759 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
20 Hb_000806_130 0.2317218307 - - Adenosine kinase 2 [Theobroma cacao]

Gene co-expression network

sample Hb_106099_010 Hb_106099_010 Hb_159582_010 Hb_159582_010 Hb_106099_010--Hb_159582_010 Hb_078081_010 Hb_078081_010 Hb_106099_010--Hb_078081_010 Hb_002681_120 Hb_002681_120 Hb_106099_010--Hb_002681_120 Hb_000300_420 Hb_000300_420 Hb_106099_010--Hb_000300_420 Hb_000236_190 Hb_000236_190 Hb_106099_010--Hb_000236_190 Hb_032208_050 Hb_032208_050 Hb_106099_010--Hb_032208_050 Hb_004958_010 Hb_004958_010 Hb_159582_010--Hb_004958_010 Hb_000032_430 Hb_000032_430 Hb_159582_010--Hb_000032_430 Hb_160405_010 Hb_160405_010 Hb_159582_010--Hb_160405_010 Hb_159582_010--Hb_032208_050 Hb_000740_090 Hb_000740_090 Hb_159582_010--Hb_000740_090 Hb_000186_290 Hb_000186_290 Hb_078081_010--Hb_000186_290 Hb_002739_040 Hb_002739_040 Hb_078081_010--Hb_002739_040 Hb_001040_200 Hb_001040_200 Hb_078081_010--Hb_001040_200 Hb_000834_040 Hb_000834_040 Hb_078081_010--Hb_000834_040 Hb_002307_010 Hb_002307_010 Hb_078081_010--Hb_002307_010 Hb_001663_120 Hb_001663_120 Hb_078081_010--Hb_001663_120 Hb_003540_120 Hb_003540_120 Hb_002681_120--Hb_003540_120 Hb_000363_260 Hb_000363_260 Hb_002681_120--Hb_000363_260 Hb_019654_060 Hb_019654_060 Hb_002681_120--Hb_019654_060 Hb_001119_070 Hb_001119_070 Hb_002681_120--Hb_001119_070 Hb_000581_030 Hb_000581_030 Hb_002681_120--Hb_000581_030 Hb_003929_190 Hb_003929_190 Hb_002681_120--Hb_003929_190 Hb_000300_420--Hb_000236_190 Hb_000806_130 Hb_000806_130 Hb_000300_420--Hb_000806_130 Hb_000077_100 Hb_000077_100 Hb_000300_420--Hb_000077_100 Hb_001329_180 Hb_001329_180 Hb_000300_420--Hb_001329_180 Hb_000236_180 Hb_000236_180 Hb_000300_420--Hb_000236_180 Hb_000580_110 Hb_000580_110 Hb_000300_420--Hb_000580_110 Hb_000236_190--Hb_000806_130 Hb_000236_190--Hb_001119_070 Hb_001486_350 Hb_001486_350 Hb_000236_190--Hb_001486_350 Hb_000236_190--Hb_001329_180 Hb_009674_010 Hb_009674_010 Hb_000236_190--Hb_009674_010 Hb_002592_050 Hb_002592_050 Hb_032208_050--Hb_002592_050 Hb_003050_100 Hb_003050_100 Hb_032208_050--Hb_003050_100 Hb_034280_010 Hb_034280_010 Hb_032208_050--Hb_034280_010 Hb_005694_180 Hb_005694_180 Hb_032208_050--Hb_005694_180 Hb_001178_090 Hb_001178_090 Hb_032208_050--Hb_001178_090 Hb_003647_040 Hb_003647_040 Hb_032208_050--Hb_003647_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.268228 0.273679 0.532806 3.69273 0.286578 0.0676762
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.352676 0 0 1.93643 0.745666

CAGE analysis