Hb_101034_020

Information

Type -
Description -
Location Contig101034: 2984-14552
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP46024.1
description hypothetical protein JCGZ_13470 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LNH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13470 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101034_020 0.0 - - hypothetical protein JCGZ_13470 [Jatropha curcas]
2 Hb_011038_020 0.0877706047 - - conserved hypothetical protein [Ricinus communis]
3 Hb_168509_020 0.1059252097 - - macrophage migration inhibitory factor family protein [Populus trichocarpa]
4 Hb_001427_220 0.1600417559 - - hypothetical protein CISIN_1g033375mg [Citrus sinensis]
5 Hb_002279_020 0.1606601329 - - hypothetical protein POPTR_0009s03100g [Populus trichocarpa]
6 Hb_009780_010 0.1637254183 - - conserved hypothetical protein [Ricinus communis]
7 Hb_092458_010 0.1742939713 - - calmodulin binding protein, putative [Ricinus communis]
8 Hb_013786_010 0.1756952331 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_003062_020 0.1878871689 - - Polyprotein, putative [Solanum demissum]
10 Hb_136546_010 0.1925689079 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
11 Hb_017098_020 0.1958455503 - - Zinc finger protein GIS2 [Medicago truncatula]
12 Hb_108551_010 0.2072158102 - - conserved hypothetical protein [Ricinus communis]
13 Hb_094439_010 0.2100500357 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
14 Hb_000417_250 0.2107760064 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
15 Hb_010614_010 0.2162396484 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
16 Hb_001631_110 0.2172232607 - - PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyltranspeptidase 1-like [Populus euphratica]
17 Hb_029576_100 0.2190432769 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
18 Hb_000732_160 0.2203223056 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
19 Hb_003077_060 0.2242776261 - - PREDICTED: 3-oxo-Delta(4,5)-steroid 5-beta-reductase-like [Jatropha curcas]
20 Hb_005433_030 0.2264079211 transcription factor TF Family: MYB unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_101034_020 Hb_101034_020 Hb_011038_020 Hb_011038_020 Hb_101034_020--Hb_011038_020 Hb_168509_020 Hb_168509_020 Hb_101034_020--Hb_168509_020 Hb_001427_220 Hb_001427_220 Hb_101034_020--Hb_001427_220 Hb_002279_020 Hb_002279_020 Hb_101034_020--Hb_002279_020 Hb_009780_010 Hb_009780_010 Hb_101034_020--Hb_009780_010 Hb_092458_010 Hb_092458_010 Hb_101034_020--Hb_092458_010 Hb_011038_020--Hb_009780_010 Hb_003062_020 Hb_003062_020 Hb_011038_020--Hb_003062_020 Hb_011038_020--Hb_168509_020 Hb_017098_020 Hb_017098_020 Hb_011038_020--Hb_017098_020 Hb_013786_010 Hb_013786_010 Hb_011038_020--Hb_013786_010 Hb_168509_020--Hb_013786_010 Hb_000417_250 Hb_000417_250 Hb_168509_020--Hb_000417_250 Hb_094439_010 Hb_094439_010 Hb_168509_020--Hb_094439_010 Hb_029576_100 Hb_029576_100 Hb_168509_020--Hb_029576_100 Hb_136546_010 Hb_136546_010 Hb_001427_220--Hb_136546_010 Hb_001388_020 Hb_001388_020 Hb_001427_220--Hb_001388_020 Hb_001427_220--Hb_013786_010 Hb_001427_220--Hb_168509_020 Hb_148121_030 Hb_148121_030 Hb_001427_220--Hb_148121_030 Hb_002279_020--Hb_092458_010 Hb_018633_010 Hb_018633_010 Hb_002279_020--Hb_018633_010 Hb_140000_010 Hb_140000_010 Hb_002279_020--Hb_140000_010 Hb_005599_020 Hb_005599_020 Hb_002279_020--Hb_005599_020 Hb_086614_010 Hb_086614_010 Hb_002279_020--Hb_086614_010 Hb_009780_010--Hb_017098_020 Hb_009780_010--Hb_003062_020 Hb_012807_070 Hb_012807_070 Hb_009780_010--Hb_012807_070 Hb_090889_010 Hb_090889_010 Hb_009780_010--Hb_090889_010 Hb_003077_060 Hb_003077_060 Hb_092458_010--Hb_003077_060 Hb_002107_110 Hb_002107_110 Hb_092458_010--Hb_002107_110 Hb_005433_030 Hb_005433_030 Hb_092458_010--Hb_005433_030 Hb_002615_010 Hb_002615_010 Hb_092458_010--Hb_002615_010 Hb_092458_010--Hb_018633_010 Hb_002010_020 Hb_002010_020 Hb_092458_010--Hb_002010_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.209356 0.244053 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.106129 0.10539

CAGE analysis