Hb_011038_020

Information

Type -
Description -
Location Contig11038: 13103-14137
Sequence    

Annotation

kegg
ID rcu:RCOM_1170350
description hypothetical protein
nr
ID XP_002533013.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID P17801
description Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2
trembl
ID B9T444
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1170350 PE=4 SV=1
Gene Ontology
ID GO:0016301
description g-type lectin s-receptor-like serine threonine-protein kinase rlk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011038_020 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_101034_020 0.0877706047 - - hypothetical protein JCGZ_13470 [Jatropha curcas]
3 Hb_009780_010 0.1019067308 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003062_020 0.108214691 - - Polyprotein, putative [Solanum demissum]
5 Hb_168509_020 0.1248049437 - - macrophage migration inhibitory factor family protein [Populus trichocarpa]
6 Hb_017098_020 0.1389417836 - - Zinc finger protein GIS2 [Medicago truncatula]
7 Hb_013786_010 0.1578493056 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_012807_070 0.1672615729 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
9 Hb_000039_190 0.1675891943 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
10 Hb_090889_010 0.1789732277 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
11 Hb_000417_250 0.1794498038 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 65 [Jatropha curcas]
12 Hb_094439_010 0.1807362333 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
13 Hb_010614_010 0.1839464122 - - leucine-rich repeat transmembrane protein kinase [Populus trichocarpa]
14 Hb_001427_220 0.1843800654 - - hypothetical protein CISIN_1g033375mg [Citrus sinensis]
15 Hb_001631_110 0.1857165915 - - PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyltranspeptidase 1-like [Populus euphratica]
16 Hb_000732_160 0.1981508642 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
17 Hb_029576_100 0.2069006745 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]
18 Hb_002279_020 0.207551011 - - hypothetical protein POPTR_0009s03100g [Populus trichocarpa]
19 Hb_057321_010 0.2149228152 - - receptor serine/threonine kinase, putative [Ricinus communis]
20 Hb_000261_370 0.2157117235 - - -

Gene co-expression network

sample Hb_011038_020 Hb_011038_020 Hb_101034_020 Hb_101034_020 Hb_011038_020--Hb_101034_020 Hb_009780_010 Hb_009780_010 Hb_011038_020--Hb_009780_010 Hb_003062_020 Hb_003062_020 Hb_011038_020--Hb_003062_020 Hb_168509_020 Hb_168509_020 Hb_011038_020--Hb_168509_020 Hb_017098_020 Hb_017098_020 Hb_011038_020--Hb_017098_020 Hb_013786_010 Hb_013786_010 Hb_011038_020--Hb_013786_010 Hb_101034_020--Hb_168509_020 Hb_001427_220 Hb_001427_220 Hb_101034_020--Hb_001427_220 Hb_002279_020 Hb_002279_020 Hb_101034_020--Hb_002279_020 Hb_101034_020--Hb_009780_010 Hb_092458_010 Hb_092458_010 Hb_101034_020--Hb_092458_010 Hb_009780_010--Hb_017098_020 Hb_009780_010--Hb_003062_020 Hb_012807_070 Hb_012807_070 Hb_009780_010--Hb_012807_070 Hb_090889_010 Hb_090889_010 Hb_009780_010--Hb_090889_010 Hb_003062_020--Hb_017098_020 Hb_003062_020--Hb_012807_070 Hb_003062_020--Hb_090889_010 Hb_000039_190 Hb_000039_190 Hb_003062_020--Hb_000039_190 Hb_168509_020--Hb_013786_010 Hb_000417_250 Hb_000417_250 Hb_168509_020--Hb_000417_250 Hb_094439_010 Hb_094439_010 Hb_168509_020--Hb_094439_010 Hb_029576_100 Hb_029576_100 Hb_168509_020--Hb_029576_100 Hb_017098_020--Hb_012807_070 Hb_001631_110 Hb_001631_110 Hb_017098_020--Hb_001631_110 Hb_017098_020--Hb_090889_010 Hb_013786_010--Hb_029576_100 Hb_013786_010--Hb_000417_250 Hb_001388_020 Hb_001388_020 Hb_013786_010--Hb_001388_020 Hb_000261_370 Hb_000261_370 Hb_013786_010--Hb_000261_370 Hb_127661_010 Hb_127661_010 Hb_013786_010--Hb_127661_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.191061 0.211845 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.09208 0.156644

CAGE analysis