Hb_136546_010

Information

Type -
Description -
Location Contig136546: 27-686
Sequence    

Annotation

kegg
ID pop:POPTR_0316s00220g
description hypothetical protein
nr
ID XP_011013617.1
description PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
swissprot
ID Q8VYA3
description Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1
trembl
ID U7DXV2
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0316s00220g PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_136546_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
2 Hb_001427_220 0.0614864152 - - hypothetical protein CISIN_1g033375mg [Citrus sinensis]
3 Hb_001388_020 0.135608496 - - PREDICTED: F-box/kelch-repeat protein SKIP20 [Jatropha curcas]
4 Hb_002811_330 0.1399717174 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
5 Hb_040963_010 0.1592248486 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
6 Hb_148121_030 0.1820436442 - - PREDICTED: zinc-finger homeodomain protein 14 [Gossypium raimondii]
7 Hb_079158_010 0.1842466385 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
8 Hb_101034_020 0.1925689079 - - hypothetical protein JCGZ_13470 [Jatropha curcas]
9 Hb_168509_020 0.1941055989 - - macrophage migration inhibitory factor family protein [Populus trichocarpa]
10 Hb_001538_040 0.1949807176 - - PREDICTED: uncharacterized protein LOC104228304 [Nicotiana sylvestris]
11 Hb_107809_010 0.1953916756 - - JHL06P13.14 [Jatropha curcas]
12 Hb_013786_010 0.1959565222 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_063523_010 0.1963840202 - - -
14 Hb_007676_040 0.1974170838 - - cellulose synthase, putative [Ricinus communis]
15 Hb_002960_010 0.2014668043 - - Zeamatin precursor, putative [Ricinus communis]
16 Hb_000521_360 0.2061806271 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
17 Hb_001634_080 0.2069821771 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
18 Hb_011038_020 0.2173012184 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005614_030 0.2185820277 - - PREDICTED: transcription factor SCREAM2-like isoform X1 [Jatropha curcas]
20 Hb_005542_040 0.2185922341 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]

Gene co-expression network

sample Hb_136546_010 Hb_136546_010 Hb_001427_220 Hb_001427_220 Hb_136546_010--Hb_001427_220 Hb_001388_020 Hb_001388_020 Hb_136546_010--Hb_001388_020 Hb_002811_330 Hb_002811_330 Hb_136546_010--Hb_002811_330 Hb_040963_010 Hb_040963_010 Hb_136546_010--Hb_040963_010 Hb_148121_030 Hb_148121_030 Hb_136546_010--Hb_148121_030 Hb_079158_010 Hb_079158_010 Hb_136546_010--Hb_079158_010 Hb_001427_220--Hb_001388_020 Hb_101034_020 Hb_101034_020 Hb_001427_220--Hb_101034_020 Hb_013786_010 Hb_013786_010 Hb_001427_220--Hb_013786_010 Hb_168509_020 Hb_168509_020 Hb_001427_220--Hb_168509_020 Hb_001427_220--Hb_148121_030 Hb_001388_020--Hb_013786_010 Hb_001388_020--Hb_040963_010 Hb_001388_020--Hb_148121_030 Hb_107809_010 Hb_107809_010 Hb_001388_020--Hb_107809_010 Hb_002960_010 Hb_002960_010 Hb_002811_330--Hb_002960_010 Hb_004079_110 Hb_004079_110 Hb_002811_330--Hb_004079_110 Hb_007676_040 Hb_007676_040 Hb_002811_330--Hb_007676_040 Hb_000521_360 Hb_000521_360 Hb_002811_330--Hb_000521_360 Hb_002435_080 Hb_002435_080 Hb_002811_330--Hb_002435_080 Hb_040963_010--Hb_148121_030 Hb_000149_120 Hb_000149_120 Hb_040963_010--Hb_000149_120 Hb_005618_110 Hb_005618_110 Hb_040963_010--Hb_005618_110 Hb_002928_220 Hb_002928_220 Hb_040963_010--Hb_002928_220 Hb_002740_170 Hb_002740_170 Hb_040963_010--Hb_002740_170 Hb_120268_010 Hb_120268_010 Hb_148121_030--Hb_120268_010 Hb_148121_030--Hb_005618_110 Hb_000203_060 Hb_000203_060 Hb_148121_030--Hb_000203_060 Hb_148121_030--Hb_002740_170 Hb_079158_010--Hb_000203_060 Hb_124385_010 Hb_124385_010 Hb_079158_010--Hb_124385_010 Hb_002157_180 Hb_002157_180 Hb_079158_010--Hb_002157_180 Hb_008111_020 Hb_008111_020 Hb_079158_010--Hb_008111_020 Hb_000343_280 Hb_000343_280 Hb_079158_010--Hb_000343_280 Hb_079158_010--Hb_120268_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.244312 0.242901 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.338254 0.135605

CAGE analysis