Hb_124385_010

Information

Type -
Description -
Location Contig124385: 38-253
Sequence    

Annotation

kegg
ID fve:101310854
description potassium transporter 5-like
nr
ID KDP28111.1
description hypothetical protein JCGZ_13882 [Jatropha curcas]
swissprot
ID Q5JK32
description Potassium transporter 5 OS=Oryza sativa subsp. japonica GN=HAK5 PE=2 SV=2
trembl
ID A0A067JVW8
description Potassium transporter OS=Jatropha curcas GN=JCGZ_13882 PE=3 SV=1
Gene Ontology
ID GO:0016021
description potassium transporter 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_124385_010 0.0 - - hypothetical protein JCGZ_13882 [Jatropha curcas]
2 Hb_001709_070 0.0861221573 - - carbohydrate binding protein, putative [Ricinus communis]
3 Hb_004162_040 0.1060901669 - - PREDICTED: lysosomal Pro-X carboxypeptidase-like [Crassostrea gigas]
4 Hb_001856_060 0.1351228738 - - serine/threonine protein kinase, putative [Ricinus communis]
5 Hb_001013_040 0.1480114945 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
6 Hb_029508_030 0.1492044893 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
7 Hb_008503_020 0.1514251914 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
8 Hb_000203_060 0.1516863545 transcription factor TF Family: G2-like hypothetical protein POPTR_0004s05660g [Populus trichocarpa]
9 Hb_079158_010 0.1563646754 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]
10 Hb_120268_010 0.157308757 - - PREDICTED: chitin elicitor receptor kinase 1-like isoform X3 [Populus euphratica]
11 Hb_002171_070 0.1645089187 desease resistance Gene Name: NB-ARC NBS-LRR resistance gene-like protein ARGH30 [Populus trichocarpa]
12 Hb_003878_100 0.1667461941 desease resistance Gene Name: NB-ARC LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
13 Hb_001331_040 0.1670058199 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
14 Hb_000221_170 0.1706313595 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
15 Hb_000381_030 0.1713279718 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
16 Hb_000512_040 0.1727112588 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_006938_010 0.1735615029 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
18 Hb_006106_020 0.1745964545 - - ring finger protein, putative [Ricinus communis]
19 Hb_001596_040 0.1752894763 - - PREDICTED: caffeic acid 3-O-methyltransferase 1-like [Populus euphratica]
20 Hb_000556_200 0.1763069317 - - PREDICTED: AT-hook motif nuclear-localized protein 22 [Jatropha curcas]

Gene co-expression network

sample Hb_124385_010 Hb_124385_010 Hb_001709_070 Hb_001709_070 Hb_124385_010--Hb_001709_070 Hb_004162_040 Hb_004162_040 Hb_124385_010--Hb_004162_040 Hb_001856_060 Hb_001856_060 Hb_124385_010--Hb_001856_060 Hb_001013_040 Hb_001013_040 Hb_124385_010--Hb_001013_040 Hb_029508_030 Hb_029508_030 Hb_124385_010--Hb_029508_030 Hb_008503_020 Hb_008503_020 Hb_124385_010--Hb_008503_020 Hb_001709_070--Hb_004162_040 Hb_001709_070--Hb_008503_020 Hb_000221_170 Hb_000221_170 Hb_001709_070--Hb_000221_170 Hb_001709_070--Hb_029508_030 Hb_001623_470 Hb_001623_470 Hb_001709_070--Hb_001623_470 Hb_120268_010 Hb_120268_010 Hb_004162_040--Hb_120268_010 Hb_004162_040--Hb_008503_020 Hb_004162_040--Hb_000221_170 Hb_000203_060 Hb_000203_060 Hb_004162_040--Hb_000203_060 Hb_001856_060--Hb_001013_040 Hb_008080_050 Hb_008080_050 Hb_001856_060--Hb_008080_050 Hb_114025_010 Hb_114025_010 Hb_001856_060--Hb_114025_010 Hb_002435_080 Hb_002435_080 Hb_001856_060--Hb_002435_080 Hb_001331_040 Hb_001331_040 Hb_001856_060--Hb_001331_040 Hb_000411_060 Hb_000411_060 Hb_001856_060--Hb_000411_060 Hb_000381_030 Hb_000381_030 Hb_001013_040--Hb_000381_030 Hb_007875_070 Hb_007875_070 Hb_001013_040--Hb_007875_070 Hb_001013_040--Hb_001331_040 Hb_012019_020 Hb_012019_020 Hb_001013_040--Hb_012019_020 Hb_002171_070 Hb_002171_070 Hb_001013_040--Hb_002171_070 Hb_000286_190 Hb_000286_190 Hb_029508_030--Hb_000286_190 Hb_029508_030--Hb_000221_170 Hb_000920_360 Hb_000920_360 Hb_029508_030--Hb_000920_360 Hb_001864_010 Hb_001864_010 Hb_029508_030--Hb_001864_010 Hb_000876_050 Hb_000876_050 Hb_029508_030--Hb_000876_050 Hb_001489_030 Hb_001489_030 Hb_008503_020--Hb_001489_030 Hb_003086_200 Hb_003086_200 Hb_008503_020--Hb_003086_200 Hb_012053_030 Hb_012053_030 Hb_008503_020--Hb_012053_030 Hb_008503_020--Hb_001864_010 Hb_008053_070 Hb_008053_070 Hb_008503_020--Hb_008053_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 17.9373 3.53278 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 31.3126 4.04519

CAGE analysis