Hb_059924_010

Information

Type -
Description -
Location Contig59924: 12517-14444
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059924_010 0.0 - - -
2 Hb_040991_010 0.2888881639 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_103452_020 0.3214945861 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
4 Hb_006045_060 0.3246521208 - - PREDICTED: uncharacterized protein LOC104222982, partial [Nicotiana sylvestris]
5 Hb_000721_020 0.3269093915 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
6 Hb_007547_050 0.3288674671 - - Auxin response factor 9 [Aegilops tauschii]
7 Hb_001935_210 0.3410057238 - - -
8 Hb_004007_060 0.3488997341 - - Ribose-5-phosphate isomerase A [Gossypium arboreum]
9 Hb_008406_120 0.3541033265 - - -
10 Hb_045370_010 0.358041576 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000326_020 0.3678674128 - - -
12 Hb_000088_030 0.3704856182 - - hypothetical protein JCGZ_10947 [Jatropha curcas]
13 Hb_149731_010 0.3745153771 - - -
14 Hb_010232_010 0.3760297204 - - -
15 Hb_074152_010 0.376712793 - - -
16 Hb_000109_150 0.3782020555 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000525_060 0.3789661561 - - PREDICTED: uncharacterized protein LOC104211307 [Nicotiana sylvestris]
18 Hb_000739_090 0.3791988104 - - -
19 Hb_052761_010 0.3793984908 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
20 Hb_008891_010 0.3811209769 - - hypothetical protein EUGRSUZ_D01145 [Eucalyptus grandis]

Gene co-expression network

sample Hb_059924_010 Hb_059924_010 Hb_040991_010 Hb_040991_010 Hb_059924_010--Hb_040991_010 Hb_103452_020 Hb_103452_020 Hb_059924_010--Hb_103452_020 Hb_006045_060 Hb_006045_060 Hb_059924_010--Hb_006045_060 Hb_000721_020 Hb_000721_020 Hb_059924_010--Hb_000721_020 Hb_007547_050 Hb_007547_050 Hb_059924_010--Hb_007547_050 Hb_001935_210 Hb_001935_210 Hb_059924_010--Hb_001935_210 Hb_040991_010--Hb_001935_210 Hb_000525_060 Hb_000525_060 Hb_040991_010--Hb_000525_060 Hb_001773_020 Hb_001773_020 Hb_040991_010--Hb_001773_020 Hb_008507_050 Hb_008507_050 Hb_040991_010--Hb_008507_050 Hb_010603_030 Hb_010603_030 Hb_040991_010--Hb_010603_030 Hb_008891_010 Hb_008891_010 Hb_103452_020--Hb_008891_010 Hb_185326_010 Hb_185326_010 Hb_103452_020--Hb_185326_010 Hb_013394_010 Hb_013394_010 Hb_103452_020--Hb_013394_010 Hb_108854_010 Hb_108854_010 Hb_103452_020--Hb_108854_010 Hb_000789_130 Hb_000789_130 Hb_103452_020--Hb_000789_130 Hb_011344_080 Hb_011344_080 Hb_103452_020--Hb_011344_080 Hb_006045_060--Hb_000721_020 Hb_000326_020 Hb_000326_020 Hb_006045_060--Hb_000326_020 Hb_032533_010 Hb_032533_010 Hb_006045_060--Hb_032533_010 Hb_003687_180 Hb_003687_180 Hb_006045_060--Hb_003687_180 Hb_074152_010 Hb_074152_010 Hb_006045_060--Hb_074152_010 Hb_000917_250 Hb_000917_250 Hb_006045_060--Hb_000917_250 Hb_000721_020--Hb_000326_020 Hb_000721_020--Hb_032533_010 Hb_000721_020--Hb_003687_180 Hb_000721_020--Hb_074152_010 Hb_000721_020--Hb_000917_250 Hb_105427_010 Hb_105427_010 Hb_007547_050--Hb_105427_010 Hb_045370_010 Hb_045370_010 Hb_007547_050--Hb_045370_010 Hb_050686_010 Hb_050686_010 Hb_007547_050--Hb_050686_010 Hb_004097_020 Hb_004097_020 Hb_007547_050--Hb_004097_020 Hb_001329_260 Hb_001329_260 Hb_007547_050--Hb_001329_260 Hb_006483_010 Hb_006483_010 Hb_007547_050--Hb_006483_010 Hb_000832_330 Hb_000832_330 Hb_001935_210--Hb_000832_330 Hb_001414_130 Hb_001414_130 Hb_001935_210--Hb_001414_130 Hb_001811_010 Hb_001811_010 Hb_001935_210--Hb_001811_010 Hb_004330_030 Hb_004330_030 Hb_001935_210--Hb_004330_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0339871 0 0.00887288 0.00881865 0.0666037 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0202757 0 0.00807641 0

CAGE analysis