Hb_010603_030

Information

Type -
Description -
Location Contig10603: 41968-43127
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010603_030 0.0 - - -
2 Hb_134732_010 0.2060622842 - - -
3 Hb_005116_020 0.2164667957 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Sesamum indicum]
4 Hb_001951_120 0.2196338056 - - -
5 Hb_031073_010 0.2289926942 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
6 Hb_002983_100 0.2298030818 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
7 Hb_000088_030 0.2311212191 - - hypothetical protein JCGZ_10947 [Jatropha curcas]
8 Hb_000038_150 0.2369690422 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
9 Hb_000236_270 0.2439937607 - - ATP-binding cassette transporter, putative [Ricinus communis]
10 Hb_140595_010 0.2475010141 - - -
11 Hb_002903_120 0.2568259081 - - -
12 Hb_000544_120 0.2569682428 - - PREDICTED: thymidylate kinase [Jatropha curcas]
13 Hb_149731_010 0.2583489259 - - -
14 Hb_114868_010 0.2594184015 - - -
15 Hb_000115_170 0.2597340837 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
16 Hb_008406_130 0.2652980737 - - -
17 Hb_003320_030 0.2695634701 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000101_210 0.2712591511 - - PREDICTED: uncharacterized protein LOC105646445 [Jatropha curcas]
19 Hb_000853_290 0.2731900822 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
20 Hb_000853_300 0.2768758879 - - -

Gene co-expression network

sample Hb_010603_030 Hb_010603_030 Hb_134732_010 Hb_134732_010 Hb_010603_030--Hb_134732_010 Hb_005116_020 Hb_005116_020 Hb_010603_030--Hb_005116_020 Hb_001951_120 Hb_001951_120 Hb_010603_030--Hb_001951_120 Hb_031073_010 Hb_031073_010 Hb_010603_030--Hb_031073_010 Hb_002983_100 Hb_002983_100 Hb_010603_030--Hb_002983_100 Hb_000088_030 Hb_000088_030 Hb_010603_030--Hb_000088_030 Hb_000038_150 Hb_000038_150 Hb_134732_010--Hb_000038_150 Hb_134732_010--Hb_005116_020 Hb_001159_210 Hb_001159_210 Hb_134732_010--Hb_001159_210 Hb_003320_030 Hb_003320_030 Hb_134732_010--Hb_003320_030 Hb_156144_020 Hb_156144_020 Hb_134732_010--Hb_156144_020 Hb_000200_060 Hb_000200_060 Hb_134732_010--Hb_000200_060 Hb_005116_020--Hb_002983_100 Hb_005116_020--Hb_003320_030 Hb_005116_020--Hb_001159_210 Hb_005116_020--Hb_000038_150 Hb_029866_010 Hb_029866_010 Hb_005116_020--Hb_029866_010 Hb_022452_010 Hb_022452_010 Hb_001951_120--Hb_022452_010 Hb_000853_300 Hb_000853_300 Hb_001951_120--Hb_000853_300 Hb_000853_290 Hb_000853_290 Hb_001951_120--Hb_000853_290 Hb_114868_010 Hb_114868_010 Hb_001951_120--Hb_114868_010 Hb_009189_030 Hb_009189_030 Hb_001951_120--Hb_009189_030 Hb_000161_100 Hb_000161_100 Hb_031073_010--Hb_000161_100 Hb_000544_120 Hb_000544_120 Hb_031073_010--Hb_000544_120 Hb_005228_120 Hb_005228_120 Hb_031073_010--Hb_005228_120 Hb_002897_040 Hb_002897_040 Hb_031073_010--Hb_002897_040 Hb_008406_130 Hb_008406_130 Hb_031073_010--Hb_008406_130 Hb_004712_110 Hb_004712_110 Hb_031073_010--Hb_004712_110 Hb_002983_100--Hb_003320_030 Hb_141838_010 Hb_141838_010 Hb_002983_100--Hb_141838_010 Hb_059126_010 Hb_059126_010 Hb_002983_100--Hb_059126_010 Hb_033225_020 Hb_033225_020 Hb_002983_100--Hb_033225_020 Hb_001125_030 Hb_001125_030 Hb_002983_100--Hb_001125_030 Hb_140595_010 Hb_140595_010 Hb_000088_030--Hb_140595_010 Hb_000318_260 Hb_000318_260 Hb_000088_030--Hb_000318_260 Hb_002903_120 Hb_002903_120 Hb_000088_030--Hb_002903_120 Hb_002483_020 Hb_002483_020 Hb_000088_030--Hb_002483_020 Hb_045502_010 Hb_045502_010 Hb_000088_030--Hb_045502_010 Hb_000580_130 Hb_000580_130 Hb_000088_030--Hb_000580_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.639659 0.138372 0.201207 0 2.13953 0.588051
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0926596 0 0.153039 0

CAGE analysis