Hb_001951_120

Information

Type -
Description -
Location Contig1951: 106701-108375
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001951_120 0.0 - - -
2 Hb_022452_010 0.1915149459 - - -
3 Hb_000853_300 0.2032750128 - - -
4 Hb_000853_290 0.2056036353 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
5 Hb_114868_010 0.2143243968 - - -
6 Hb_009189_030 0.2147063973 - - hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
7 Hb_010603_030 0.2196338056 - - -
8 Hb_134732_010 0.2224094035 - - -
9 Hb_000200_060 0.223972109 - - palmitoyl-acyl carrier thioesterase [Medicago truncatula]
10 Hb_000205_070 0.2249370334 - - kinase, putative [Ricinus communis]
11 Hb_000176_060 0.2320938552 - - unnamed protein product [Vitis vinifera]
12 Hb_000836_050 0.2500544104 - - -
13 Hb_140595_010 0.2588146871 - - -
14 Hb_003222_010 0.2594452112 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
15 Hb_000544_120 0.2632728478 - - PREDICTED: thymidylate kinase [Jatropha curcas]
16 Hb_027255_010 0.2660443322 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
17 Hb_040779_010 0.2665966935 - - -
18 Hb_000146_060 0.2675297155 - - -
19 Hb_003337_070 0.2676508207 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
20 Hb_000362_240 0.272694015 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001951_120 Hb_001951_120 Hb_022452_010 Hb_022452_010 Hb_001951_120--Hb_022452_010 Hb_000853_300 Hb_000853_300 Hb_001951_120--Hb_000853_300 Hb_000853_290 Hb_000853_290 Hb_001951_120--Hb_000853_290 Hb_114868_010 Hb_114868_010 Hb_001951_120--Hb_114868_010 Hb_009189_030 Hb_009189_030 Hb_001951_120--Hb_009189_030 Hb_010603_030 Hb_010603_030 Hb_001951_120--Hb_010603_030 Hb_001276_010 Hb_001276_010 Hb_022452_010--Hb_001276_010 Hb_000176_060 Hb_000176_060 Hb_022452_010--Hb_000176_060 Hb_171659_010 Hb_171659_010 Hb_022452_010--Hb_171659_010 Hb_003816_020 Hb_003816_020 Hb_022452_010--Hb_003816_020 Hb_000205_070 Hb_000205_070 Hb_022452_010--Hb_000205_070 Hb_004846_180 Hb_004846_180 Hb_000853_300--Hb_004846_180 Hb_000853_300--Hb_000853_290 Hb_182807_020 Hb_182807_020 Hb_000853_300--Hb_182807_020 Hb_025194_030 Hb_025194_030 Hb_000853_300--Hb_025194_030 Hb_004097_020 Hb_004097_020 Hb_000853_300--Hb_004097_020 Hb_006745_020 Hb_006745_020 Hb_000853_290--Hb_006745_020 Hb_000853_290--Hb_182807_020 Hb_000853_290--Hb_009189_030 Hb_000853_290--Hb_025194_030 Hb_007044_010 Hb_007044_010 Hb_000853_290--Hb_007044_010 Hb_001584_230 Hb_001584_230 Hb_114868_010--Hb_001584_230 Hb_081636_010 Hb_081636_010 Hb_114868_010--Hb_081636_010 Hb_005799_030 Hb_005799_030 Hb_114868_010--Hb_005799_030 Hb_029866_010 Hb_029866_010 Hb_114868_010--Hb_029866_010 Hb_001135_270 Hb_001135_270 Hb_114868_010--Hb_001135_270 Hb_009686_010 Hb_009686_010 Hb_114868_010--Hb_009686_010 Hb_003222_010 Hb_003222_010 Hb_009189_030--Hb_003222_010 Hb_027255_010 Hb_027255_010 Hb_009189_030--Hb_027255_010 Hb_009189_030--Hb_000205_070 Hb_004631_160 Hb_004631_160 Hb_009189_030--Hb_004631_160 Hb_003337_070 Hb_003337_070 Hb_009189_030--Hb_003337_070 Hb_134732_010 Hb_134732_010 Hb_010603_030--Hb_134732_010 Hb_005116_020 Hb_005116_020 Hb_010603_030--Hb_005116_020 Hb_031073_010 Hb_031073_010 Hb_010603_030--Hb_031073_010 Hb_002983_100 Hb_002983_100 Hb_010603_030--Hb_002983_100 Hb_000088_030 Hb_000088_030 Hb_010603_030--Hb_000088_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.162829 0.0847897 0.0380441 0 0.380667 0.133396
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis