Hb_006745_020

Information

Type -
Description -
Location Contig6745: 35759-36355
Sequence    

Annotation

kegg
ID pmum:103331667
description 22.0 kDa class IV heat shock protein
nr
ID XP_012072628.1
description PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
swissprot
ID P19244
description 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1
trembl
ID A0A067KS43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06695 PE=3 SV=1
Gene Ontology
ID GO:0005788
description kda class iv heat shock protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006745_020 0.0 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
2 Hb_003337_070 0.1356440333 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
3 Hb_000853_290 0.1658412163 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
4 Hb_000205_070 0.1747708012 - - kinase, putative [Ricinus communis]
5 Hb_184326_010 0.1771311535 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
6 Hb_003647_120 0.1788059414 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
7 Hb_000398_130 0.178891125 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
8 Hb_182807_020 0.1845884172 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
9 Hb_000488_030 0.1880425424 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
10 Hb_007044_010 0.1950332684 - - -
11 Hb_025194_030 0.1950873262 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
12 Hb_009189_030 0.2061381806 - - hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
13 Hb_008616_030 0.2093313031 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-10 isoform X1 [Jatropha curcas]
14 Hb_004846_180 0.2096942046 - - heat shock protein, putative [Ricinus communis]
15 Hb_027255_010 0.2105533185 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
16 Hb_004631_160 0.2108987943 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
17 Hb_001279_230 0.21436748 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
18 Hb_000001_160 0.2166449842 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X2 [Jatropha curcas]
19 Hb_011639_010 0.2240594668 - - -
20 Hb_000206_130 0.2354296425 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_006745_020 Hb_006745_020 Hb_003337_070 Hb_003337_070 Hb_006745_020--Hb_003337_070 Hb_000853_290 Hb_000853_290 Hb_006745_020--Hb_000853_290 Hb_000205_070 Hb_000205_070 Hb_006745_020--Hb_000205_070 Hb_184326_010 Hb_184326_010 Hb_006745_020--Hb_184326_010 Hb_003647_120 Hb_003647_120 Hb_006745_020--Hb_003647_120 Hb_000398_130 Hb_000398_130 Hb_006745_020--Hb_000398_130 Hb_003337_070--Hb_000205_070 Hb_003337_070--Hb_003647_120 Hb_001279_230 Hb_001279_230 Hb_003337_070--Hb_001279_230 Hb_009189_030 Hb_009189_030 Hb_003337_070--Hb_009189_030 Hb_003337_070--Hb_184326_010 Hb_000853_300 Hb_000853_300 Hb_000853_290--Hb_000853_300 Hb_182807_020 Hb_182807_020 Hb_000853_290--Hb_182807_020 Hb_000853_290--Hb_009189_030 Hb_025194_030 Hb_025194_030 Hb_000853_290--Hb_025194_030 Hb_007044_010 Hb_007044_010 Hb_000853_290--Hb_007044_010 Hb_027255_010 Hb_027255_010 Hb_000205_070--Hb_027255_010 Hb_000176_060 Hb_000176_060 Hb_000205_070--Hb_000176_060 Hb_000205_070--Hb_009189_030 Hb_022452_010 Hb_022452_010 Hb_000205_070--Hb_022452_010 Hb_184326_010--Hb_182807_020 Hb_004846_180 Hb_004846_180 Hb_184326_010--Hb_004846_180 Hb_184326_010--Hb_025194_030 Hb_184326_010--Hb_003647_120 Hb_003647_120--Hb_001279_230 Hb_001723_110 Hb_001723_110 Hb_003647_120--Hb_001723_110 Hb_003647_120--Hb_000398_130 Hb_000488_030 Hb_000488_030 Hb_000398_130--Hb_000488_030 Hb_005730_100 Hb_005730_100 Hb_000398_130--Hb_005730_100 Hb_000398_130--Hb_001279_230 Hb_000398_130--Hb_027255_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
299.191 804.742 26.1484 69.407 1997.65 812.711
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.5153 2.87827 11.0387 31.8795 160.167

CAGE analysis