Hb_000853_300

Information

Type -
Description -
Location Contig853: 225247-230890
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0006457
description PREDICTED: uncharacterized protein LOC105642585

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000853_300 0.0 - - -
2 Hb_004846_180 0.1737314737 - - heat shock protein, putative [Ricinus communis]
3 Hb_000853_290 0.1777410581 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
4 Hb_182807_020 0.1895002352 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
5 Hb_025194_030 0.1961740642 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
6 Hb_001951_120 0.2032750128 - - -
7 Hb_004097_020 0.2080073495 - - conserved hypothetical protein [Ricinus communis]
8 Hb_140595_010 0.2088095732 - - -
9 Hb_000544_120 0.2151496812 - - PREDICTED: thymidylate kinase [Jatropha curcas]
10 Hb_000212_130 0.2152618635 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004659_070 0.215657761 - - PREDICTED: organ-specific protein P4-like [Vitis vinifera]
12 Hb_184326_010 0.2163037139 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
13 Hb_000018_160 0.2170510868 - - nitrate transporter, putative [Ricinus communis]
14 Hb_000205_070 0.2171147658 - - kinase, putative [Ricinus communis]
15 Hb_007382_020 0.2220472373 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
16 Hb_007044_010 0.2282062271 - - -
17 Hb_022452_010 0.2310368456 - - -
18 Hb_031073_010 0.2335105235 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
19 Hb_000836_050 0.2351268279 - - -
20 Hb_000176_060 0.238244105 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_000853_300 Hb_000853_300 Hb_004846_180 Hb_004846_180 Hb_000853_300--Hb_004846_180 Hb_000853_290 Hb_000853_290 Hb_000853_300--Hb_000853_290 Hb_182807_020 Hb_182807_020 Hb_000853_300--Hb_182807_020 Hb_025194_030 Hb_025194_030 Hb_000853_300--Hb_025194_030 Hb_001951_120 Hb_001951_120 Hb_000853_300--Hb_001951_120 Hb_004097_020 Hb_004097_020 Hb_000853_300--Hb_004097_020 Hb_004846_180--Hb_025194_030 Hb_004846_180--Hb_182807_020 Hb_184326_010 Hb_184326_010 Hb_004846_180--Hb_184326_010 Hb_008749_050 Hb_008749_050 Hb_004846_180--Hb_008749_050 Hb_007382_020 Hb_007382_020 Hb_004846_180--Hb_007382_020 Hb_006745_020 Hb_006745_020 Hb_000853_290--Hb_006745_020 Hb_000853_290--Hb_182807_020 Hb_009189_030 Hb_009189_030 Hb_000853_290--Hb_009189_030 Hb_000853_290--Hb_025194_030 Hb_007044_010 Hb_007044_010 Hb_000853_290--Hb_007044_010 Hb_182807_020--Hb_184326_010 Hb_000206_130 Hb_000206_130 Hb_182807_020--Hb_000206_130 Hb_000205_070 Hb_000205_070 Hb_182807_020--Hb_000205_070 Hb_182807_020--Hb_006745_020 Hb_025194_030--Hb_007382_020 Hb_025194_030--Hb_008749_050 Hb_025194_030--Hb_184326_010 Hb_000140_370 Hb_000140_370 Hb_025194_030--Hb_000140_370 Hb_022452_010 Hb_022452_010 Hb_001951_120--Hb_022452_010 Hb_001951_120--Hb_000853_290 Hb_114868_010 Hb_114868_010 Hb_001951_120--Hb_114868_010 Hb_001951_120--Hb_009189_030 Hb_010603_030 Hb_010603_030 Hb_001951_120--Hb_010603_030 Hb_000140_150 Hb_000140_150 Hb_004097_020--Hb_000140_150 Hb_002918_310 Hb_002918_310 Hb_004097_020--Hb_002918_310 Hb_001946_360 Hb_001946_360 Hb_004097_020--Hb_001946_360 Hb_006631_010 Hb_006631_010 Hb_004097_020--Hb_006631_010 Hb_000173_210 Hb_000173_210 Hb_004097_020--Hb_000173_210 Hb_000619_070 Hb_000619_070 Hb_004097_020--Hb_000619_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.4111 11.2194 1.06617 0.573653 38.4555 10.6954
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.22488 1.39816 0.584523 0 0.214773

CAGE analysis