Hb_008749_050

Information

Type -
Description -
Location Contig8749: 45676-48376
Sequence    

Annotation

kegg
ID pop:POPTR_0010s12370g
description POPTRDRAFT_822090; hypothetical protein
nr
ID XP_012072208.1
description PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]
swissprot
ID Q72GN6
description Chaperone protein DnaJ OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1
trembl
ID A0A067L0M2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04688 PE=4 SV=1
Gene Ontology
ID GO:0005634
description dnaj homolog subfamily b member 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61240: 45834-48362
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008749_050 0.0 - - PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]
2 Hb_000008_230 0.1400953565 - - hypothetical protein POPTR_0004s22120g [Populus trichocarpa]
3 Hb_025194_030 0.1464903782 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
4 Hb_000140_370 0.1475537814 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
5 Hb_012340_020 0.16043164 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Jatropha curcas]
6 Hb_004846_180 0.1717982165 - - heat shock protein, putative [Ricinus communis]
7 Hb_002918_310 0.1753067077 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
8 Hb_007382_020 0.1828479752 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
9 Hb_002374_440 0.1847261995 - - conserved hypothetical protein [Ricinus communis]
10 Hb_097433_010 0.1857292703 - - PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]
11 Hb_002344_090 0.1938966906 - - PREDICTED: uncharacterized protein LOC105637976 [Jatropha curcas]
12 Hb_000206_130 0.1984680054 - - unnamed protein product [Vitis vinifera]
13 Hb_085375_010 0.2016071712 - - protein with unknown function [Ricinus communis]
14 Hb_035947_010 0.2036935166 - - PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Elaeis guineensis]
15 Hb_002311_250 0.2057432904 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
16 Hb_029388_040 0.2089067206 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
17 Hb_001769_020 0.2100302213 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Jatropha curcas]
18 Hb_001534_070 0.2127328791 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Eucalyptus grandis]
19 Hb_000122_250 0.2163381063 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 2C, putative [Ricinus communis]
20 Hb_003992_260 0.2178497701 - - PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_008749_050 Hb_008749_050 Hb_000008_230 Hb_000008_230 Hb_008749_050--Hb_000008_230 Hb_025194_030 Hb_025194_030 Hb_008749_050--Hb_025194_030 Hb_000140_370 Hb_000140_370 Hb_008749_050--Hb_000140_370 Hb_012340_020 Hb_012340_020 Hb_008749_050--Hb_012340_020 Hb_004846_180 Hb_004846_180 Hb_008749_050--Hb_004846_180 Hb_002918_310 Hb_002918_310 Hb_008749_050--Hb_002918_310 Hb_001769_020 Hb_001769_020 Hb_000008_230--Hb_001769_020 Hb_000008_230--Hb_012340_020 Hb_002344_090 Hb_002344_090 Hb_000008_230--Hb_002344_090 Hb_035947_010 Hb_035947_010 Hb_000008_230--Hb_035947_010 Hb_002374_440 Hb_002374_440 Hb_000008_230--Hb_002374_440 Hb_007382_020 Hb_007382_020 Hb_025194_030--Hb_007382_020 Hb_025194_030--Hb_004846_180 Hb_184326_010 Hb_184326_010 Hb_025194_030--Hb_184326_010 Hb_025194_030--Hb_000140_370 Hb_000853_290 Hb_000853_290 Hb_025194_030--Hb_000853_290 Hb_001269_560 Hb_001269_560 Hb_000140_370--Hb_001269_560 Hb_000140_370--Hb_004846_180 Hb_000140_370--Hb_012340_020 Hb_000140_370--Hb_002918_310 Hb_001534_070 Hb_001534_070 Hb_012340_020--Hb_001534_070 Hb_012340_020--Hb_002374_440 Hb_000206_130 Hb_000206_130 Hb_012340_020--Hb_000206_130 Hb_010068_030 Hb_010068_030 Hb_012340_020--Hb_010068_030 Hb_012340_020--Hb_002918_310 Hb_003688_200 Hb_003688_200 Hb_012340_020--Hb_003688_200 Hb_182807_020 Hb_182807_020 Hb_004846_180--Hb_182807_020 Hb_004846_180--Hb_184326_010 Hb_000853_300 Hb_000853_300 Hb_004846_180--Hb_000853_300 Hb_004846_180--Hb_007382_020 Hb_000720_070 Hb_000720_070 Hb_002918_310--Hb_000720_070 Hb_002918_310--Hb_001534_070 Hb_002965_030 Hb_002965_030 Hb_002918_310--Hb_002965_030 Hb_002918_310--Hb_035947_010 Hb_000152_560 Hb_000152_560 Hb_002918_310--Hb_000152_560
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
62.7375 143.688 14.8504 15.8511 494.053 70.8835
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
35.0407 30.982 52.5119 7.24098 19.8205

CAGE analysis