Hb_000140_370

Information

Type -
Description -
Location Contig140: 361427-367784
Sequence    

Annotation

kegg
ID rcu:RCOM_1617200
description hypothetical protein
nr
ID XP_012083282.1
description PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
swissprot
ID O82345
description BAG family molecular chaperone regulator 6 OS=Arabidopsis thaliana GN=BAG6 PE=1 SV=1
trembl
ID A0A067K8D2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14311 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10863: 358636-361713 , PASA_asmbl_10866: 363193-365064 , PASA_asmbl_10869: 366455-367861
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000140_370 0.0 - - PREDICTED: BAG family molecular chaperone regulator 6 [Jatropha curcas]
2 Hb_008749_050 0.1475537814 - - PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Jatropha curcas]
3 Hb_025194_030 0.1749461588 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
4 Hb_001269_560 0.1783876281 - - heat-shock protein 70 [Hevea brasiliensis]
5 Hb_004846_180 0.2087549301 - - heat shock protein, putative [Ricinus communis]
6 Hb_012340_020 0.213786776 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Jatropha curcas]
7 Hb_002918_310 0.2169198729 - - PREDICTED: dnaJ protein homolog 1-like [Jatropha curcas]
8 Hb_000122_250 0.2224597704 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 2C, putative [Ricinus communis]
9 Hb_002999_060 0.2250124927 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
10 Hb_184326_010 0.2279008294 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
11 Hb_000488_010 0.2325308859 - - 18.1 kDa class I heat shock protein [Jatropha curcas]
12 Hb_000206_130 0.2364909434 - - unnamed protein product [Vitis vinifera]
13 Hb_002344_090 0.239939794 - - PREDICTED: uncharacterized protein LOC105637976 [Jatropha curcas]
14 Hb_006745_020 0.2417717335 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
15 Hb_007382_020 0.2439867179 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
16 Hb_013394_060 0.2457360581 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
17 Hb_097433_010 0.2479336906 - - PREDICTED: TPR repeat-containing thioredoxin TDX [Jatropha curcas]
18 Hb_000720_070 0.2479806195 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]
19 Hb_004296_010 0.2484824068 - - PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Jatropha curcas]
20 Hb_000008_230 0.2486820851 - - hypothetical protein POPTR_0004s22120g [Populus trichocarpa]

Gene co-expression network

sample Hb_000140_370 Hb_000140_370 Hb_008749_050 Hb_008749_050 Hb_000140_370--Hb_008749_050 Hb_025194_030 Hb_025194_030 Hb_000140_370--Hb_025194_030 Hb_001269_560 Hb_001269_560 Hb_000140_370--Hb_001269_560 Hb_004846_180 Hb_004846_180 Hb_000140_370--Hb_004846_180 Hb_012340_020 Hb_012340_020 Hb_000140_370--Hb_012340_020 Hb_002918_310 Hb_002918_310 Hb_000140_370--Hb_002918_310 Hb_000008_230 Hb_000008_230 Hb_008749_050--Hb_000008_230 Hb_008749_050--Hb_025194_030 Hb_008749_050--Hb_012340_020 Hb_008749_050--Hb_004846_180 Hb_008749_050--Hb_002918_310 Hb_007382_020 Hb_007382_020 Hb_025194_030--Hb_007382_020 Hb_025194_030--Hb_004846_180 Hb_184326_010 Hb_184326_010 Hb_025194_030--Hb_184326_010 Hb_000853_290 Hb_000853_290 Hb_025194_030--Hb_000853_290 Hb_004846_170 Hb_004846_170 Hb_001269_560--Hb_004846_170 Hb_000684_340 Hb_000684_340 Hb_001269_560--Hb_000684_340 Hb_125948_020 Hb_125948_020 Hb_001269_560--Hb_125948_020 Hb_001269_560--Hb_004846_180 Hb_003647_120 Hb_003647_120 Hb_001269_560--Hb_003647_120 Hb_182807_020 Hb_182807_020 Hb_004846_180--Hb_182807_020 Hb_004846_180--Hb_184326_010 Hb_000853_300 Hb_000853_300 Hb_004846_180--Hb_000853_300 Hb_004846_180--Hb_007382_020 Hb_001534_070 Hb_001534_070 Hb_012340_020--Hb_001534_070 Hb_002374_440 Hb_002374_440 Hb_012340_020--Hb_002374_440 Hb_000206_130 Hb_000206_130 Hb_012340_020--Hb_000206_130 Hb_010068_030 Hb_010068_030 Hb_012340_020--Hb_010068_030 Hb_012340_020--Hb_002918_310 Hb_003688_200 Hb_003688_200 Hb_012340_020--Hb_003688_200 Hb_000720_070 Hb_000720_070 Hb_002918_310--Hb_000720_070 Hb_002918_310--Hb_001534_070 Hb_002965_030 Hb_002965_030 Hb_002918_310--Hb_002965_030 Hb_035947_010 Hb_035947_010 Hb_002918_310--Hb_035947_010 Hb_000152_560 Hb_000152_560 Hb_002918_310--Hb_000152_560
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.1674 111.854 3.27554 14.1111 199.32 26.5823
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.35825 8.06826 16.5392 7.13805 12.908

CAGE analysis