Hb_182807_020

Information

Type -
Description -
Location Contig182807: 3451-4635
Sequence    

Annotation

kegg
ID pop:POPTR_0016s01890g
description hypothetical protein
nr
ID AFD61601.1
description anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
swissprot
ID Q40284
description Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot esculenta GN=GT1 PE=2 SV=1
trembl
ID H9BMN5
description Anthocyanidin 3-O-glucosyltransferase OS=Hevea brasiliensis GN=ANGT1 PE=2 SV=1
Gene Ontology
ID GO:0047213
description anthocyanidin 3-o-glucosyltransferase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 053_L23.ab1: 3434-4231

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182807_020 0.0 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
2 Hb_184326_010 0.1045985057 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
3 Hb_004846_180 0.140565845 - - heat shock protein, putative [Ricinus communis]
4 Hb_000206_130 0.1718380668 - - unnamed protein product [Vitis vinifera]
5 Hb_000205_070 0.1769979414 - - kinase, putative [Ricinus communis]
6 Hb_006745_020 0.1845884172 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
7 Hb_000853_290 0.1868848893 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
8 Hb_003647_120 0.1892162357 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
9 Hb_000853_300 0.1895002352 - - -
10 Hb_025194_030 0.1902916594 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
11 Hb_012340_020 0.2008596191 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial [Jatropha curcas]
12 Hb_000212_130 0.2028134257 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003337_070 0.2028694544 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
14 Hb_000739_290 0.2083731935 - - cytochrome P450, putative [Ricinus communis]
15 Hb_004631_160 0.2111648379 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
16 Hb_027255_010 0.2202856279 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
17 Hb_007382_020 0.2263970105 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
18 Hb_000001_160 0.2265029958 - - PREDICTED: probable glutamate carboxypeptidase 2 isoform X2 [Jatropha curcas]
19 Hb_009189_030 0.2289933584 - - hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
20 Hb_029388_040 0.2315722725 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_182807_020 Hb_182807_020 Hb_184326_010 Hb_184326_010 Hb_182807_020--Hb_184326_010 Hb_004846_180 Hb_004846_180 Hb_182807_020--Hb_004846_180 Hb_000206_130 Hb_000206_130 Hb_182807_020--Hb_000206_130 Hb_000205_070 Hb_000205_070 Hb_182807_020--Hb_000205_070 Hb_006745_020 Hb_006745_020 Hb_182807_020--Hb_006745_020 Hb_000853_290 Hb_000853_290 Hb_182807_020--Hb_000853_290 Hb_184326_010--Hb_004846_180 Hb_025194_030 Hb_025194_030 Hb_184326_010--Hb_025194_030 Hb_003647_120 Hb_003647_120 Hb_184326_010--Hb_003647_120 Hb_184326_010--Hb_006745_020 Hb_003337_070 Hb_003337_070 Hb_184326_010--Hb_003337_070 Hb_004846_180--Hb_025194_030 Hb_008749_050 Hb_008749_050 Hb_004846_180--Hb_008749_050 Hb_000853_300 Hb_000853_300 Hb_004846_180--Hb_000853_300 Hb_007382_020 Hb_007382_020 Hb_004846_180--Hb_007382_020 Hb_012340_020 Hb_012340_020 Hb_000206_130--Hb_012340_020 Hb_001534_070 Hb_001534_070 Hb_000206_130--Hb_001534_070 Hb_003688_200 Hb_003688_200 Hb_000206_130--Hb_003688_200 Hb_002374_440 Hb_002374_440 Hb_000206_130--Hb_002374_440 Hb_006816_120 Hb_006816_120 Hb_000206_130--Hb_006816_120 Hb_027255_010 Hb_027255_010 Hb_000205_070--Hb_027255_010 Hb_000205_070--Hb_003337_070 Hb_000176_060 Hb_000176_060 Hb_000205_070--Hb_000176_060 Hb_009189_030 Hb_009189_030 Hb_000205_070--Hb_009189_030 Hb_022452_010 Hb_022452_010 Hb_000205_070--Hb_022452_010 Hb_000205_070--Hb_006745_020 Hb_006745_020--Hb_003337_070 Hb_006745_020--Hb_000853_290 Hb_006745_020--Hb_003647_120 Hb_000398_130 Hb_000398_130 Hb_006745_020--Hb_000398_130 Hb_000853_290--Hb_000853_300 Hb_000853_290--Hb_009189_030 Hb_000853_290--Hb_025194_030 Hb_007044_010 Hb_007044_010 Hb_000853_290--Hb_007044_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.1658 41.3789 1.21259 3.40809 118.87 51.4921
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.6969 1.49029 2.16825 2.66114 0.335005

CAGE analysis