Hb_008891_010

Information

Type -
Description -
Location Contig8891: 818-2341
Sequence    

Annotation

kegg
ID bvg:104894942
description uncharacterized LOC104894942
nr
ID KCW76794.1
description hypothetical protein EUGRSUZ_D01145 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059CEV2
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01145 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008891_010 0.0 - - hypothetical protein EUGRSUZ_D01145 [Eucalyptus grandis]
2 Hb_004007_060 0.2746466544 - - Ribose-5-phosphate isomerase A [Gossypium arboreum]
3 Hb_103452_020 0.2982424595 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
4 Hb_000260_540 0.3309410089 - - hypothetical protein JCGZ_00592 [Jatropha curcas]
5 Hb_001251_030 0.3405411018 - - hypothetical protein PHAVU_002G189800g [Phaseolus vulgaris]
6 Hb_005800_040 0.3429764931 - - -
7 Hb_052761_010 0.3437748875 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
8 Hb_013394_010 0.3473666387 - - PREDICTED: laccase-14-like [Malus domestica]
9 Hb_011344_080 0.3493233247 - - -
10 Hb_000739_090 0.3515503722 - - -
11 Hb_108854_010 0.3567077593 - - hypothetical protein JCGZ_00277 [Jatropha curcas]
12 Hb_008983_060 0.3635655631 desease resistance Gene Name: NB-ARC NB-ARC domain-containing disease resistance protein, putative [Theobroma cacao]
13 Hb_152587_010 0.364538108 - - -
14 Hb_185326_010 0.3671081547 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004266_010 0.3677129812 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
16 Hb_001999_190 0.3768790456 - - GDP-mannose transporter, putative [Ricinus communis]
17 Hb_001491_060 0.3789401563 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like isoform X1 [Populus euphratica]
18 Hb_059924_010 0.3811209769 - - -
19 Hb_007192_060 0.3888999091 - - conserved hypothetical protein [Ricinus communis]
20 Hb_045370_010 0.4009950391 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_008891_010 Hb_008891_010 Hb_004007_060 Hb_004007_060 Hb_008891_010--Hb_004007_060 Hb_103452_020 Hb_103452_020 Hb_008891_010--Hb_103452_020 Hb_000260_540 Hb_000260_540 Hb_008891_010--Hb_000260_540 Hb_001251_030 Hb_001251_030 Hb_008891_010--Hb_001251_030 Hb_005800_040 Hb_005800_040 Hb_008891_010--Hb_005800_040 Hb_052761_010 Hb_052761_010 Hb_008891_010--Hb_052761_010 Hb_006502_100 Hb_006502_100 Hb_004007_060--Hb_006502_100 Hb_004007_060--Hb_000260_540 Hb_000816_010 Hb_000816_010 Hb_004007_060--Hb_000816_010 Hb_152587_010 Hb_152587_010 Hb_004007_060--Hb_152587_010 Hb_000879_050 Hb_000879_050 Hb_004007_060--Hb_000879_050 Hb_185326_010 Hb_185326_010 Hb_103452_020--Hb_185326_010 Hb_013394_010 Hb_013394_010 Hb_103452_020--Hb_013394_010 Hb_108854_010 Hb_108854_010 Hb_103452_020--Hb_108854_010 Hb_000789_130 Hb_000789_130 Hb_103452_020--Hb_000789_130 Hb_011344_080 Hb_011344_080 Hb_103452_020--Hb_011344_080 Hb_000260_540--Hb_152587_010 Hb_000260_540--Hb_006502_100 Hb_007008_020 Hb_007008_020 Hb_000260_540--Hb_007008_020 Hb_000100_050 Hb_000100_050 Hb_000260_540--Hb_000100_050 Hb_011978_010 Hb_011978_010 Hb_000260_540--Hb_011978_010 Hb_001251_030--Hb_005800_040 Hb_001251_030--Hb_013394_010 Hb_001251_030--Hb_011344_080 Hb_001251_030--Hb_052761_010 Hb_000739_090 Hb_000739_090 Hb_001251_030--Hb_000739_090 Hb_006156_020 Hb_006156_020 Hb_001251_030--Hb_006156_020 Hb_005800_040--Hb_013394_010 Hb_005800_040--Hb_011344_080 Hb_005800_040--Hb_052761_010 Hb_005800_040--Hb_000739_090 Hb_005800_040--Hb_006156_020 Hb_052761_010--Hb_000739_090 Hb_005867_010 Hb_005867_010 Hb_052761_010--Hb_005867_010 Hb_001364_020 Hb_001364_020 Hb_052761_010--Hb_001364_020 Hb_000038_160 Hb_000038_160 Hb_052761_010--Hb_000038_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0195562 0 0 0.0164328 0.036651 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0141123 0

CAGE analysis