Hb_000816_010

Information

Type -
Description -
Location Contig816: 5744-13056
Sequence    

Annotation

kegg
ID pop:POPTR_0008s07560g
description POPTRDRAFT_820440; hypothetical protein
nr
ID XP_012091201.1
description PREDICTED: uncharacterized protein At2g40430 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCY4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03362 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59391: 5547-10929
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000816_010 0.0 - - PREDICTED: uncharacterized protein At2g40430 isoform X2 [Jatropha curcas]
2 Hb_000789_130 0.1696155882 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
3 Hb_014919_020 0.1947809622 - - -
4 Hb_000984_250 0.2303976722 - - PREDICTED: uncharacterized protein LOC105630783 [Jatropha curcas]
5 Hb_003740_010 0.2328919712 - - conserved hypothetical protein [Ricinus communis]
6 Hb_059301_010 0.2414245 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
7 Hb_045481_010 0.2436949008 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
8 Hb_007645_120 0.2651650771 - - hypothetical protein POPTR_0006s05370g [Populus trichocarpa]
9 Hb_001944_030 0.2667565847 - - hypothetical protein POPTR_0007s06520g [Populus trichocarpa]
10 Hb_006269_040 0.2678341569 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
11 Hb_005568_100 0.2688539221 - - vacuolar proton ATPase a3-like protein [Medicago truncatula]
12 Hb_000189_430 0.2729772977 - - unnamed protein product [Vitis vinifera]
13 Hb_091761_010 0.2757263664 - - Rhomboid protein, putative [Ricinus communis]
14 Hb_001952_130 0.2760337734 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
15 Hb_054436_010 0.2762491469 - - PREDICTED: uncharacterized protein LOC105638666 [Jatropha curcas]
16 Hb_000003_150 0.276463208 - - PREDICTED: probable protein arginine N-methyltransferase 6 [Jatropha curcas]
17 Hb_010531_050 0.2789838794 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
18 Hb_114984_010 0.2848440601 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000413_150 0.2850139284 - - PREDICTED: uncharacterized protein LOC103709996 [Phoenix dactylifera]
20 Hb_004007_060 0.2869830255 - - Ribose-5-phosphate isomerase A [Gossypium arboreum]

Gene co-expression network

sample Hb_000816_010 Hb_000816_010 Hb_000789_130 Hb_000789_130 Hb_000816_010--Hb_000789_130 Hb_014919_020 Hb_014919_020 Hb_000816_010--Hb_014919_020 Hb_000984_250 Hb_000984_250 Hb_000816_010--Hb_000984_250 Hb_003740_010 Hb_003740_010 Hb_000816_010--Hb_003740_010 Hb_059301_010 Hb_059301_010 Hb_000816_010--Hb_059301_010 Hb_045481_010 Hb_045481_010 Hb_000816_010--Hb_045481_010 Hb_000789_130--Hb_000984_250 Hb_010521_020 Hb_010521_020 Hb_000789_130--Hb_010521_020 Hb_005568_100 Hb_005568_100 Hb_000789_130--Hb_005568_100 Hb_000505_110 Hb_000505_110 Hb_000789_130--Hb_000505_110 Hb_000453_140 Hb_000453_140 Hb_000789_130--Hb_000453_140 Hb_161023_010 Hb_161023_010 Hb_014919_020--Hb_161023_010 Hb_000413_150 Hb_000413_150 Hb_014919_020--Hb_000413_150 Hb_188411_010 Hb_188411_010 Hb_014919_020--Hb_188411_010 Hb_014919_020--Hb_059301_010 Hb_014919_020--Hb_005568_100 Hb_001952_130 Hb_001952_130 Hb_000984_250--Hb_001952_130 Hb_006915_020 Hb_006915_020 Hb_000984_250--Hb_006915_020 Hb_010531_050 Hb_010531_050 Hb_000984_250--Hb_010531_050 Hb_000733_050 Hb_000733_050 Hb_000984_250--Hb_000733_050 Hb_013016_020 Hb_013016_020 Hb_000984_250--Hb_013016_020 Hb_003740_010--Hb_059301_010 Hb_160233_020 Hb_160233_020 Hb_003740_010--Hb_160233_020 Hb_003740_010--Hb_014919_020 Hb_003740_010--Hb_188411_010 Hb_133605_010 Hb_133605_010 Hb_003740_010--Hb_133605_010 Hb_059301_010--Hb_045481_010 Hb_000123_100 Hb_000123_100 Hb_059301_010--Hb_000123_100 Hb_059301_010--Hb_160233_020 Hb_001138_030 Hb_001138_030 Hb_045481_010--Hb_001138_030 Hb_129459_010 Hb_129459_010 Hb_045481_010--Hb_129459_010 Hb_000003_140 Hb_000003_140 Hb_045481_010--Hb_000003_140 Hb_167508_010 Hb_167508_010 Hb_045481_010--Hb_167508_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.190284 0.0672302 0.170972 0.133976 0.249631 0.0481658
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0802654 0

CAGE analysis