Hb_059301_010

Information

Type -
Description -
Location Contig59301: 390-2176
Sequence    

Annotation

kegg
ID pop:POPTR_0011s036602
description hypothetical protein
nr
ID XP_012084625.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
swissprot
ID Q39086
description Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1
trembl
ID A0A067K6D5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20198 PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rks1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059301_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
2 Hb_045481_010 0.1852814538 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
3 Hb_014919_020 0.2002322416 - - -
4 Hb_003740_010 0.2004440484 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000816_010 0.2414245 - - PREDICTED: uncharacterized protein At2g40430 isoform X2 [Jatropha curcas]
6 Hb_000123_100 0.251165621 - - Uncharacterized protein TCM_024608 [Theobroma cacao]
7 Hb_160233_020 0.2522548133 - - -
8 Hb_001944_030 0.253147799 - - hypothetical protein POPTR_0007s06520g [Populus trichocarpa]
9 Hb_118346_010 0.2595042249 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
10 Hb_071379_010 0.2647812187 - - PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Nelumbo nucifera]
11 Hb_001214_170 0.2787387284 - - pyruvate kinase family protein [Medicago truncatula]
12 Hb_005568_100 0.281439488 - - vacuolar proton ATPase a3-like protein [Medicago truncatula]
13 Hb_167508_010 0.284626152 - - hypothetical protein POPTR_0001s27330g [Populus trichocarpa]
14 Hb_000789_130 0.2853510105 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
15 Hb_161023_010 0.2854538996 - - PREDICTED: uncharacterized protein LOC105639929 [Jatropha curcas]
16 Hb_000189_060 0.2973933392 - - PREDICTED: uncharacterized protein LOC105637477 [Jatropha curcas]
17 Hb_188411_010 0.3018258554 - - PREDICTED: U3 small nucleolar RNA-associated protein 25 [Jatropha curcas]
18 Hb_129459_010 0.3055676448 - - PREDICTED: pentatricopeptide repeat-containing protein At4g18840-like [Populus euphratica]
19 Hb_000513_080 0.3066655431 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Jatropha curcas]
20 Hb_000413_150 0.3094601317 - - PREDICTED: uncharacterized protein LOC103709996 [Phoenix dactylifera]

Gene co-expression network

sample Hb_059301_010 Hb_059301_010 Hb_045481_010 Hb_045481_010 Hb_059301_010--Hb_045481_010 Hb_014919_020 Hb_014919_020 Hb_059301_010--Hb_014919_020 Hb_003740_010 Hb_003740_010 Hb_059301_010--Hb_003740_010 Hb_000816_010 Hb_000816_010 Hb_059301_010--Hb_000816_010 Hb_000123_100 Hb_000123_100 Hb_059301_010--Hb_000123_100 Hb_160233_020 Hb_160233_020 Hb_059301_010--Hb_160233_020 Hb_001138_030 Hb_001138_030 Hb_045481_010--Hb_001138_030 Hb_129459_010 Hb_129459_010 Hb_045481_010--Hb_129459_010 Hb_000003_140 Hb_000003_140 Hb_045481_010--Hb_000003_140 Hb_045481_010--Hb_000816_010 Hb_167508_010 Hb_167508_010 Hb_045481_010--Hb_167508_010 Hb_161023_010 Hb_161023_010 Hb_014919_020--Hb_161023_010 Hb_014919_020--Hb_000816_010 Hb_000413_150 Hb_000413_150 Hb_014919_020--Hb_000413_150 Hb_188411_010 Hb_188411_010 Hb_014919_020--Hb_188411_010 Hb_005568_100 Hb_005568_100 Hb_014919_020--Hb_005568_100 Hb_003740_010--Hb_160233_020 Hb_003740_010--Hb_014919_020 Hb_003740_010--Hb_000816_010 Hb_003740_010--Hb_188411_010 Hb_133605_010 Hb_133605_010 Hb_003740_010--Hb_133605_010 Hb_000789_130 Hb_000789_130 Hb_000816_010--Hb_000789_130 Hb_000984_250 Hb_000984_250 Hb_000816_010--Hb_000984_250 Hb_113823_010 Hb_113823_010 Hb_000123_100--Hb_113823_010 Hb_000123_100--Hb_160233_020 Hb_004800_050 Hb_004800_050 Hb_000123_100--Hb_004800_050 Hb_004640_040 Hb_004640_040 Hb_000123_100--Hb_004640_040 Hb_001214_170 Hb_001214_170 Hb_000123_100--Hb_001214_170 Hb_160233_020--Hb_161023_010 Hb_160233_020--Hb_001214_170 Hb_160233_020--Hb_188411_010 Hb_160233_020--Hb_014919_020 Hb_160233_020--Hb_129459_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.24905 0.0577446 0.351299 0.0672137 0.358653 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.050616 0

CAGE analysis